Pre_GI: BLASTP Hits

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Query: NC_004337:3049118:3086270 Shigella flexneri 2a str. 301, complete genome

Start: 3086270, End: 3087142, Length: 873

Host Lineage: Shigella flexneri; Shigella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated in 1984 from a patient in Beijing, China. It is similar to pathogenic Escherichia coli except for the more numerous insertion sequences and contains a virulence plasmid (pCP301). Causes enteric disease. Shigella This genus is named for the Japanese scientist (Shiga) who discovered them in the 1890s. They are closely related to the Escherichia group, and may be considered the same species. are human-specific pathogens that are transmitted via contaminated food and water and are the leading causes of endemic bacillary dysentery, and over 1 million deaths worldwide are attributed to them. The bacteria infect the epithelial lining of the colon, causing acute inflammation by entering the host cell cytoplasm and spreading intercellularly. are extremely virulent organisms that require very few cells in order to cause disease. Both the type III secretion system, which delivers effector molecules into the host cell, and some of the translocated effectors such as the invasion plasmid antigens (Ipas), are encoded on the plasmid. The bacterium produces a surface protein that localizes to one pole of the cell (IcsA) which binds to and promotes actin polymerization, resulting in movement of the bacterium through the cell cytoplasm, and eventually to neighboring cells, which results in inflammatory destruction of the mucosal lining. This organism, along with Shigella sonnei, is the major cause of shigellosis in industrialized countries and is responsible for endemic infections.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017328:3088907:312597531259753126847873Shigella flexneri 2002017 chromosome, complete genomeputative GTPase7e-169592
NC_004741:3041294:307710030771003077972873Shigella flexneri 2a str. 2457T, complete genomehypothetical protein7e-169592
NC_004431:3409389:349060834906083491480873Escherichia coli CFT073, complete genomeHypothetical protein yeeP3e-165580
NC_013716:5201097:522755352275535228464912Citrobacter rodentium ICC168, complete genomeputative GTP-binding protein3e-164577
NC_008253:334467:351386351386352258873Escherichia coli 536, complete genomehypothetical protein4e-164577
NC_013361:3313284:3324187332418733252631077Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein2e-163575
NC_008253:3161311:316756631675663168438873Escherichia coli 536, complete genomehypothetical protein6e-163573
NC_004431:1211000:122440712244071225279873Escherichia coli CFT073, complete genomeHypothetical protein yeeP3e-163573
NC_007946:1119000:113240811324081133280873Escherichia coli UTI89, complete genomehypothetical protein6e-162570
NC_009708:915814:918013918013918888876Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeGTPase3e-98358
NC_011283:4966471:498842449884244989299876Klebsiella pneumoniae 342 chromosome, complete genomeGTPase family protein1e-97355
NC_016816:1137904:115424211542421155117876Pantoea ananatis LMG 5342, complete genomeGTPase family protein1e-96353
AP010958:5272863:528447952844795285354876Escherichia coli O103:H2 str. 12009 DNA, complete genomehypothetical protein9e-97353
NC_013353:5272863:528447952844795285354876Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein9e-97353
NC_016612:443398:460493460493461368876Klebsiella oxytoca KCTC 1686 chromosome, complete genomeGTPase7e-96350
NC_011415:308825:321721321721322596876Escherichia coli SE11 chromosome, complete genomehypothetical protein1e-93343
NC_013592:3263005:326398732639873264862876Dickeya dadantii Ech586, complete genomeGTP-binding protein HSR1-related protein4e-85314
NC_014618:4114004:412456441245644125427864Enterobacter cloacae SCF1 chromosome, complete genomeGTP-binding protein HSR1-like protein9e-75280
NC_012912:1053618:108081010808101081676867Dickeya zeae Ech1591, complete genomeGTP-binding protein HSR1-related1e-73276
NC_013592:446092:465509465509466375867Dickeya dadantii Ech586, complete genomeGTP-binding protein HSR1-related protein1e-72273
NC_000913:2746886:276573227657322766595864Escherichia coli K12, complete genomeCP4-57 prophage; predicted GTP-binding protein7e-73273
AC_000091:2747520:276636627663662767229864Escherichia coli W3110 DNA, complete genomepredicted GTP-binding protein7e-73273
NC_010473:2839902:285749728574972858360864Escherichia coli str. K-12 substr. DH10B, complete genomeCP4-57 prophage; predicted GTP-binding protein7e-73273
NC_012759:2633949:265154426515442652407864Escherichia coli BW2952 chromosome, complete genomeCP4-57 prophage; putative GTP-binding protein7e-73273
NC_014618:690056:718630718630719493864Enterobacter cloacae SCF1 chromosome, complete genomeGTP-binding protein HSR1-like protein6e-70264
NC_013421:1505176:150699515069951507870876Pectobacterium wasabiae WPP163, complete genomeGTP-binding protein HSR1-related protein7e-69260
NC_012917:3241196:326166632616663262541876Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeGTP-binding protein HSR1-related1e-67256
NC_020418:116500:134409134409135272864Morganella morganii subsp. morganii KT, complete genomeputative GTP-binding protein4e-64244
NC_014121:3776902:378788937878893788773885Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completePredicted GTPase1e-62239
NC_020260:882307:897892897892898776885Cronobacter sakazakii Sp291, complete genomeputative GTPase1e-62239
NC_016902:4236680:4243851424385142448641014Escherichia coli KO11FL chromosome, complete genomeGTP-binding protein HSR1-like protein2e-62239
CP002185:4750571:4768005476800547690181014Escherichia coli W, complete genomePredicted GTPase2e-62239
CP002516:4236680:4243851424385142448641014Escherichia coli KO11, complete genomeGTP-binding protein HSR1-related protein2e-62239
NC_015663:549425:566437566437567351915Enterobacter aerogenes KCTC 2190 chromosome, complete genomeHSR1-like GTP-binding protein4e-60231
NC_020181:5130513:513750951375095138396888Enterobacter aerogenes EA1509E, complete genomeNgrB7e-59227
NC_010634:1342393:134709313470931347980888Yersinia pseudotuberculosis PB1/+, complete genomeGTP-binding protein HSR1-related8e-58223
NC_015663:1:289722897229865894Enterobacter aerogenes KCTC 2190 chromosome, complete genomeGTP-binding protein4e-50198
NC_011750:4775770:477969247796924780576885Escherichia coli IAI39 chromosome, complete genomeputative GTPase6e-50197
NC_007946:4875997:488969248896924890576885Escherichia coli UTI89, complete genomehypothetical protein7e-50197
NC_008253:4817864:483019048301904831074885Escherichia coli 536, complete genomehypothetical protein7e-50197
NC_011750:4390000:440741744074174408301885Escherichia coli IAI39 chromosome, complete genomeputative GTPase1e-49196
NC_004431:4319152:433443443344344335318885Escherichia coli CFT073, complete genomehypothetical protein4e-49195
NC_011745:3405520:341935134193513420235885Escherichia coli ED1a chromosome, complete genomeputative GTPase5e-49194
NC_008563:4707826:471356147135614714445885Escherichia coli APEC O1, complete genomeputative GTPase9e-49194
NC_015663:1356982:137405013740501374943894Enterobacter aerogenes KCTC 2190 chromosome, complete genomeGTP-binding protein5e-48191
NC_011083:4547825:457015245701524571036885Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative GTPase5e-48191
NC_016612:2009927:204213720421372043027891Klebsiella oxytoca KCTC 1686 chromosome, complete genomeGTP-binding protein7e-44177
NC_005085:1269787:127396712739671274848882Chromobacterium violaceum ATCC 12472, complete genomehypothetical protein2e-41169
NC_016002:2946702:296701629670162967630615Pseudogulbenkiania sp. NH8B, complete genomeHSR1-like GTP-binding protein7e-34144
CU928145:2973968:299136929913692991668300Escherichia coli 55989 chromosome, complete genomeputative GTP-binding factor (fragment) from putative CP4-like prophage5e-1891.7
NC_011748:2973968:299136929913692991668300Escherichia coli 55989, complete genomeputative GTP-binding factor (fragment) from putative CP4-like prophage5e-1891.7
CP002797:4656327:466120746612074661332126Escherichia coli NA114, complete genomeHypothetical protein5e-1478.6
NC_019673:8581000:8598835859883586000491215Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein1e-0654.3
NC_006576:414696:4396664396664415101845Synechococcus elongatus PCC 6301, complete genomehypothetical protein4e-0652
NC_015519:1205049:1207321120732112086401320Tepidanaerobacter sp. Re1 chromosome, complete genomeGTP-binding protein engA1e-0550.8