Pre_GI: BLASTP Hits

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Query: NC_004129:957890:964774 Pseudomonas fluorescens Pf-5, complete genome

Start: 964774, End: 965403, Length: 630

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012560:4311906:432910743291074329730624Azotobacter vinelandii DJ, complete genomeribosomal RNA large subunit methyltransferase J/FtsJ4e-100363
NC_021150:4311902:432910343291034329726624Azotobacter vinelandii CA6, complete genomeribosomal RNA large subunit methyltransferase J/FtsJ4e-100363
NC_009654:1123709:113542511354251136015591Marinomonas sp. MWYL1, complete genomeribosomal RNA methyltransferase RrmJ/FtsJ6e-73273
NC_008740:443274:446439446439447062624Marinobacter aquaeolei VT8, complete genomeribosomal RNA methyltransferase RrmJ/FtsJ6e-73273
NC_020063:528296:529346529346529975630Enterobacteriaceae bacterium strain FGI 57, complete genome23S rRNA Um-2552 2'-O-methyltransferase4e-68257
NC_013716:4885776:489508948950894895718630Citrobacter rodentium ICC168, complete genomecell division protein2e-67254
NC_008702:1514707:151470715147071515324618Azoarcus sp. BH72, complete genomeribosomal RNA large subunit methyltransferase j2e-67254
NC_015968:4117835:415950241595024160128627Enterobacter asburiae LF7a chromosome, complete genomeribosomal RNA large subunit methyltransferase E4e-66250
NC_012880:3915500:392761839276183928247630Dickeya dadantii Ech703, complete genomeribosomal RNA large subunit methyltransferase J2e-64244
NC_015581:771482:775232775232775849618Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomeRibosomal RNA large subunit methyltransferase E1e-63242
NC_002528:404545:424252424252424872621Buchnera aphidicola str. APS (Acyrthosiphon pisum), completecell division protein FtsJ1e-50199
NC_017259:388000:406824406824407444621Buchnera aphidicola str. Ua (Uroleucon ambrosiae) chromosome,cell division protein FtsJ1e-48192
NC_019814:320260:333156333156333791636Candidatus Kinetoplastibacterium blastocrithidii (ex Strigomonas23S rRNA (uridine2552-2'-O)-methyltransferase2e-46185
NC_010524:3094303:310479231047923105490699Leptothrix cholodnii SP-6, complete genomeribosomal RNA methyltransferase RrmJ/FtsJ7e-46183
NC_020075:114790:117612117612118238627Candidatus Blochmannia chromaiodes str. 640, complete genomeribosomal RNA large subunit methyltransferase E7e-46183
NC_020299:149118:162017162017162652636Candidatus Kinetoplastibacterium oncopeltii TCC290E, completeribosomal RNA large subunit methyltransferase E1e-45182
NC_005061:96536:105196105196105816621Candidatus Blochmannia floridanus, complete genomecell division protein 23S rRNA methyltransferase FtsJ1e-44179
NC_010161:205500:226050226050226778729Bartonella tribocorum CIP 105476, complete genomecell division protein ftsJ6e-44177
NC_005956:196976:217493217493218236744Bartonella henselae str. Houston-1, complete genomeCell division protein ftsJ9e-43172
NC_020301:174467:200044200044200772729Bartonella vinsonii subsp. berkhoffii str. Winnie, complete genomecell division protein ftsJ1e-42172
NC_016893:563890:568641568641569252612Wigglesworthia glossinidia endosymbiont of Glossina morsitans23 S rRNA methyltransferase2e-42172
NC_016078:913713:933866933866934582717Pelagibacterium halotolerans B2 chromosome, complete genomecell division protein FtsJ / ribosomal RNA large subunit methyltransferase J2e-42171
NC_005955:173436:193137193137193862726Bartonella quintana str. Toulouse, complete genomeCell division protein ftsJ2e-41169
NC_007626:4135961:416184241618424162576735Magnetospirillum magneticum AMB-1, complete genome23S rRNA methylase1e-41169
NC_019815:782987:792224792224792859636Candidatus Kinetoplastibacterium crithidii (ex Angomonas deanei23S rRNA (uridine2552-2'-O)-methyltransferase3e-41168
NC_004545:392685:405411405411406043633Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genomeribosomal RNA large subunit methyltransferase J5e-41167
NC_014932:1232346:123760612376061238322717Bartonella clarridgeiae 73, complete genomecell division protein ftsJ1e-39162
NC_003901:2727361:272736127273612728167807Methanosarcina mazei Go1, complete genomemethyltransferase1e-39162
NC_007681:402773:427007427007427627621Methanosphaera stadtmanae DSM 3091, complete genomeputative 23S rRNA methylase6e-39160
NC_014909:86000:109668109668110321654Candidatus Blochmannia vafer str. BVAF chromosome, complete genomeribosomal RNA large subunit methyltransferase, ftsJ-like protein5e-39160
NC_013926:1270173:127017312701731270760588Aciduliprofundum boonei T469 chromosome, complete genomeribosomal RNA methyltransferase RrmJ/FtsJ2e-38158
NC_018876:996855:996855996855997631777Methanolobus psychrophilus R15 chromosome, complete genomeribosomal RNA methyltransferase RrmJ/FtsJ4e-38157
NC_009515:474285:479993479993480625633Methanobrevibacter smithii ATCC 35061, complete genomecell division protein J (23S rRNA methylase), FtsJ4e-36150
NC_012108:442493:464183464183464794612Desulfobacterium autotrophicum HRM2, complete genomeputative ribosomal RNA methyltransferase 1 (23S rRNA methylase)7e-31133
NC_018607:1648607:165223616522361652820585Brachyspira pilosicoli B2904 chromosome, complete genomeribosomal RNA methyltransferase RrmJ/FtsJ2e-26119
NC_014330:313813:316946316946317530585Brachyspira pilosicoli 95/1000 chromosome, complete genomeribosomal RNA methyltransferase RrmJ/FtsJ2e-26119
NC_018604:1137797:115436211543621154946585Brachyspira pilosicoli WesB complete genomeribosomal RNA methyltransferase RrmJ/FtsJ3e-26118
NC_004344:257471:274162274162274772611Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis,hypothetical protein2e-23108
NC_019908:323375:341282341282341794513Brachyspira pilosicoli P43/6/78 chromosome, complete genomeribosomal RNA methyltransferase RrmJ/FtsJ2e-21102
NC_010741:745357:747628747628748230603Treponema pallidum subsp. pallidum SS14, complete genomecell division protein1e-1686.3
NC_016843:747950:747950747950748552603Treponema pallidum subsp. pertenue str. Gauthier chromosome,23S rRNA methyltransferase1e-1686.3
NC_016844:748117:748117748117748719603Treponema pallidum subsp. pallidum DAL-1 chromosome, complete23S rRNA methyltransferase1e-1686.3
NC_017268:747429:747429747429748031603Treponema pallidum subsp. pallidum str. Chicago chromosome,ribosomal RNA large subunit methyltransferase J1e-1686.3
NC_021508:745388:747659747659748261603Treponema pallidum subsp. pallidum SS14, complete genome23S rRNA methyltransferase1e-1686.3
NC_015714:741044:741044741044741646603Treponema paraluiscuniculi Cuniculi A chromosome, complete genome23S rRNA methyltransferase1e-1686.3