Pre_GI: BLASTP Hits

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Query: NC_004129:5781413:5792221 Pseudomonas fluorescens Pf-5, complete genome

Start: 5792221, End: 5792550, Length: 330

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015497:3614817:362285636228563623173318Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomecytochrome o ubiquinol oxidase subunit IV2e-1891.3
NC_012779:2127542:213816321381632138501339Edwardsiella ictaluri 93-146, complete genomecytochrome o ubiquinol oxidase subunit IV, putative7e-1889.4
NC_007508:1446526:146796114679611468296336Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomecytochrome O ubiquinol oxidase subunit IV2e-1684.7
NC_010943:1379707:139737813973781397719342Stenotrophomonas maltophilia K279a, complete genomeputative transmembrane quinol oxidase subunit 42e-1580.9
NC_015663:2694373:272537727253772725706330Enterobacter aerogenes KCTC 2190 chromosome, complete genomecytochrome o ubiquinol oxidase subunit IV4e-1580.1
NC_020181:2714559:271952727195272720402876Enterobacter aerogenes EA1509E, complete genomeCytochrome O ubiquinol oxidase subunit III5e-1579.7
NC_004741:366822:380502380502380831330Shigella flexneri 2a str. 2457T, complete genomecytochrome o ubiquinol oxidase subunit IV8e-1579
NC_004337:367687:381369381369381698330Shigella flexneri 2a str. 301, complete genomecytochrome o ubiquinol oxidase subunit IV8e-1579
NC_008258:401786:419020419020419349330Shigella flexneri 5 str. 8401, complete genomecytochrome o ubiquinol oxidase subunit IV8e-1579
NC_017328:385552:399233399233399562330Shigella flexneri 2002017 chromosome, complete genomeCytochrome O ubiquinol oxidase protein CyoD8e-1579
NC_009654:91096:103477103477103800324Marinomonas sp. MWYL1, complete genomecytochrome o ubiquinol oxidase subunit IV6e-1476.3
NC_015723:1047418:105118610511861051611426Cupriavidus necator N-1 chromosome 2, complete sequencecytochrome o ubiquinol oxidase protein CyoD6e-1166.2
NC_017259:480656:492747492747493088342Buchnera aphidicola str. Ua (Uroleucon ambrosiae) chromosome,cytochrome O ubiquinol oxidase subunit IV2e-0961.2
NC_004061:498483:514996514996515322327Buchnera aphidicola str. Sg (Schizaphis graminum), complete genomecytochrome O ubiquinol oxidase D5e-0856.6
NC_015422:2326942:234745923474592347833375Alicycliphilus denitrificans K601 chromosome, complete genomecytochrome o ubiquinol oxidase subunit IV1e-0755.1
NC_014910:2045088:206409620640962064470375Alicycliphilus denitrificans BC chromosome, complete genomecytochrome o ubiquinol oxidase subunit iv1e-0755.1