Pre_GI: BLASTP Hits

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Query: NC_004129:5723787:5751191 Pseudomonas fluorescens Pf-5, complete genome

Start: 5751191, End: 5751814, Length: 624

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007005:4857768:487843448784344879060627Pseudomonas syringae pv. syringae B728a, complete genomeGlutathione S-transferase, N-terminal2e-47189
NC_004578:4940000:496249249624924963274783Pseudomonas syringae pv. tomato str. DC3000, complete genomeglutathione S-transferase family protein2e-44178
NC_004463:5722468:572292457229245723592669Bradyrhizobium japonicum USDA 110, complete genomeglutathione S-transferase2e-37155
NC_016589:2875000:290897629089762909596621Burkholderia sp. YI23 chromosome 1, complete sequenceglutathione S-transferase9e-35146
NC_007951:4608560:463290546329054633558654Burkholderia xenovorans LB400 chromosome 1, complete sequenceGlutathione S-transferase2e-33142
NC_014640:6815264:684700768470076847669663Achromobacter xylosoxidans A8 chromosome, complete genomeglutathione S-transferase2e-31135
NC_011001:854713:856869856869857588720Burkholderia cenocepacia J2315 chromosome 2, complete sequenceglutathione-S-tranferase family protein4e-29127
NC_008543:582129:584287584287585006720Burkholderia cenocepacia HI2424 chromosome 2, complete sequenceGlutathione S-transferase, N-terminal domain5e-29127
NC_012997:59407:781017810178772672Teredinibacter turnerae T7901, complete genomeglutathione S-transferase family protein2e-27121
NC_008781:2883968:289913728991372899793657Polaromonas naphthalenivorans CJ2, complete genomeglutathione S-transferase-like protein1e-25116
NC_012808:4235567:423556742355674236223657Methylobacterium extorquens AM1, complete genomeputative glutathione S-transferase2e-25115
NC_010172:4185904:418722041872204187876657Methylobacterium extorquens PA1, complete genomeputative glutathione-S-transferase protein2e-25115
NC_012988:4633930:463393046339304634586657Methylobacterium extorquens DM4, complete genomeglutathione S-transferase2e-25115
NC_006677:1503513:150351315035131504160648Gluconobacter oxydans 621H, complete genomeGlutathione S-transferase4e-21101
NC_007492:2771021:277714827771482777780633Pseudomonas fluorescens PfO-1, complete genomeGlutathione S-transferase-like7e-1270.5
NC_015856:764651:766923766923767534612Collimonas fungivorans Ter331 chromosome, complete genomestringent starvation protein A2e-1065.9
NC_014323:4619344:464292846429284643539612Herbaspirillum seropedicae SmR1 chromosome, complete genomestringent starvation transcription regulator A protein2e-1065.5
NC_020211:4598217:462031346203134620948636Serratia marcescens WW4, complete genomeglutathione S-transferase3e-1065.1
NC_015731:3274739:329524432952443295843600Nitrosomonas sp. Is79A3 chromosome, complete genomeGlutathione S-transferase domain-containing protein2e-0962.8
NC_012724:359444:365613365613366224612Burkholderia glumae BGR1 chromosome 1, complete genomeGlutathione S-transferase1e-0860.1
NC_015381:429940:436557436557437168612Burkholderia gladioli BSR3 chromosome 1, complete sequenceglutathione S-transferase1e-0860.1
NC_009074:3559211:357465935746593575270612Burkholderia pseudomallei 668 chromosome I, complete sequencestringent starvation protein A1e-0859.7
NC_006350:3710641:372554737255473726158612Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative stringent starvation protein A1e-0859.7
NC_010508:451184:457825457825458436612Burkholderia cenocepacia MC0-3 chromosome 1, complete sequenceGlutathione S-transferase domain1e-0859.7
NC_008060:2913671:293621029362102936821612Burkholderia cenocepacia AU 1054 chromosome 1, complete sequenceglutathione S-transferase-like1e-0859.7
NC_008542:483761:489824489824490435612Burkholderia cenocepacia HI2424 chromosome 1, complete sequenceGlutathione S-transferase, N-terminal domain1e-0859.7
NC_010682:3313944:335182233518223352433612Ralstonia pickettii 12J chromosome 1, complete sequenceGlutathione S-transferase domain5e-0857.8
NC_012856:3000839:301326730132673013878612Ralstonia pickettii 12D chromosome 1, complete genomeGlutathione S-transferase domain protein5e-0857.8
NC_008800:2013450:202950620295062030141636Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative transferase1e-0756.2
NC_010552:2454776:246331724633172463997681Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceGlutathione S-transferase domain2e-0756.2
NC_014307:533975:541148541148541759612Ralstonia solanacearum CFBP2957 chromosome, complete genomestringent starvation protein a, regulator of transcription2e-0755.5
NC_010676:2975572:297557229755722976204633Burkholderia phytofirmans PsJN chromosome 2, complete sequenceGlutathione S-transferase domain5e-0754.7
NC_010162:7571525:759098575909857591608624Sorangium cellulosum 'So ce 56', complete genomehypothetical protein7e-0753.9
NC_021150:4929670:493289049328904933519630Azotobacter vinelandii CA6, complete genomeGlutathione S-transferase8e-0753.9
NC_012560:4929683:493290349329034933532630Azotobacter vinelandii DJ, complete genomeGlutathione S-transferase8e-0753.9
NC_013716:4824541:484625948462594846897639Citrobacter rodentium ICC168, complete genomestringent starvation protein A1e-0653.1
NC_003295:2787371:279963727996372800311675Ralstonia solanacearum GMI1000, complete genomePROBABLE GLUTATHIONE-S-TRANSFERASE PROTEIN3e-0652
NC_004547:1837500:184098218409821841674693Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeprobable glutathione-S-transferase3e-0651.6
NC_015856:2488297:249016224901622490794633Collimonas fungivorans Ter331 chromosome, complete genomeglutathione S-transferase3e-0651.6
NC_014539:743523:751585751585752217633Burkholderia sp. CCGE1003 chromosome 1, complete sequenceglutathione S-transferase domain-containing protein7e-0650.4