Pre_GI: BLASTP Hits

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Query: NC_004129:4434259:4451415 Pseudomonas fluorescens Pf-5, complete genome

Start: 4451415, End: 4452710, Length: 1296

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009655:2148433:2160615216061521618021188Actinobacillus succinogenes 130Z chromosome, complete genomeglycosyl hydrolase BNR repeat-containing glycosyl hydrolase1e-1997.8
NC_014500:4049384:4072119407211940732941176Dickeya dadantii 3937 chromosome, complete genomeexpressed protein7e-1892
NC_020291:4305521:4311484431148443126801197Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeputative neuraminidase8e-1892
NC_003197:1320861:1336322133632213373651044Salmonella typhimurium LT2, complete genomeputative cytoplasmic protein1e-1378.2
NC_016810:1276340:1293175129317512942181044Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein1e-1378.2
NC_016856:1326503:1346297134629713473401044Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative cytoplasmic protein1e-1378.2
NC_016857:1276340:1293175129317512942181044Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative cytoplasmic protein1e-1378.2
NC_016860:1317174:1334009133400913350521044Salmonella enterica subsp. enterica serovar Typhimurium strputative cytoplasmic protein1e-1378.2
NC_016863:1277652:1294487129448712955301044Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative cytoplasmic protein1e-1378.2
NC_017046:1277787:1293248129324812942911044Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein1e-1378.2
NC_011094:1282385:1302987130298713040301044Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein3e-1377
NC_011080:1321268:1338099133809913391421044Salmonella enterica subsp. enterica serovar Newport str. SL254,putative cytoplasmic protein6e-1375.9
NC_011149:1870931:1876099187609918771421044Salmonella enterica subsp. enterica serovar Agona str. SL483,putative cytoplasmic protein8e-1375.5
NC_010067:1655815:1661024166102416620671044Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-1275.1
NC_006905:1342474:1367941136794113689841044Salmonella enterica subsp. enterica serovar Choleraesuis strputative cytoplasmic protein1e-1274.7
NC_011274:1928939:1934107193410719351501044Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein1e-1274.7
NC_011294:1896168:1901336190133619023791044Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein1e-1274.7
NC_011083:1323827:1341364134136413424071044Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative cytoplasmic protein1e-1274.7
NC_012125:2531817:2536987253698725380301044Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein2e-1274.3
NC_010102:1779707:1784875178487517859181044Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-1273.9
NC_003198:1771432:1776622177662217776651044Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein8e-1272
NC_007086:1457531:1457531145753114585981068Xanthomonas campestris pv. campestris str. 8004, complete genomehypothetical protein3e-1170.5
NC_016832:1182496:1202439120243912034821044Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,BNR/Asp-box repeat domain protein3e-1170.5
NC_004631:1182883:1203467120346712045101044Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein3e-1170.5
NC_010688:1435694:1435694143569414367611068Xanthomonas campestris pv. campestris, complete genomeexported exo-alpha-sialidase4e-1169.7
NC_017267:3333036:3356650335665033577531104Xanthomonas oryzae pv. oryzicola BLS256 chromosome, completeBNR-Asp-box repeat domain protein2e-1067.4
NC_010676:304405:3174813174813185811101Burkholderia phytofirmans PsJN chromosome 2, complete sequencehypothetical protein1e-0964.7