Pre_GI: BLASTP Hits

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Query: NC_004088:3923804:3924120 Yersinia pestis KIM, complete genome

Start: 3924120, End: 3924410, Length: 291

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009381:460358:480055480055480345291Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein1e-49194
NC_003143:675622:698088698088698378291Yersinia pestis CO92, complete genomehypothetical protein1e-49194
NC_008149:587689:607659607659607949291Yersinia pestis Nepal516, complete genomehypothetical protein1e-49194
NC_010465:660207:675604675604676206603Yersinia pseudotuberculosis YPIII, complete genomeputative phage terminase, small subunit2e-44177
NC_006155:4062000:406237040623704062972603Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein1e-43174
NC_010634:4001154:400257640025764003178603Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein7e-43172
NC_009012:2927793:294521629452162945665450Clostridium thermocellum ATCC 27405, complete genomeTerminase small subunit4e-0650.1
NC_020134:420500:432110432110432376267Clostridium stercorarium subsp. stercorarium DSM 8532, completeterminase small subunit5e-0649.7