Pre_GI: BLASTP Hits

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Query: NC_003902:4430621:4437026 Xanthomonas campestris pv. campestris str. ATCC 33913, complete

Start: 4437026, End: 4437886, Length: 861

Host Lineage: Xanthomonas campestris; Xanthomonas; Xanthomonadaceae; Xanthomonadales; Proteobacteria; Bacteria

General Information: This strain was originally isolated from cabbage. Causes black rot disease in crucifers. This genus consists of plant-specific yellow-pigmented microbes, some of which are economically important phytopathogens that devastate crops such as citrus plants, rice, beans, grape, and cotton. These organisms are almost exclusively found associated with their plant hosts and are not found free in the soil. This species is a major cause of black rot in crucifers, a disease that results in massive tissue degeneration. It also produces an extracellular polysaccharide known as xanthan, which is harvested commercially as a food stabilizing agent for use in industry.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007086:4489153:449460944946094495469861Xanthomonas campestris pv. campestris str. 8004, complete genomehistidine kinase/response regulator hybrid protein7e-162569
NC_007516:731193:757162757162757884723Synechococcus sp. CC9605, complete genomeGAF4e-37155
NC_010501:3448389:3474392347439234754291038Pseudomonas putida W619, complete genomediguanylate cyclase with GAF sensor2e-36153
NC_008027:2331617:2347081234708123481271047Pseudomonas entomophila L48, complete genomediguanylate cyclase (GGDEF domain)5e-36151
NC_009512:3618055:3629390362939036304271038Pseudomonas putida F1, complete genomediguanylate cyclase2e-35149
NC_016745:546249:5462495462495490832835Oceanimonas sp. GK1 chromosome, complete genometwo-component hybrid sensor and regulator1e-34147
NC_012483:1567253:1587454158745415885631110Acidobacterium capsulatum ATCC 51196, complete genomeGAF domain/GGDEF domain protein2e-34145
NC_005070:334952:374938374938375657720Synechococcus sp. WH 8102, complete genomehypothetical protein6e-34144
NC_007513:1503955:150800415080041508741738Synechococcus sp. CC9902, complete genomeGAF3e-33142
NC_009649:94871:107129107129108085957Klebsiella pneumoniae subsp. pneumoniae MGH 78578 plasmid pKPN3,hypothetical protein2e-30132
NC_013730:778076:7780767780767820053930Spirosoma linguale DSM 74, complete genomemulti-sensor hybrid histidine kinase8e-30130
NC_014958:3346500:3350668335066833521971530Deinococcus maricopensis DSM 21211 chromosome, complete genomeGAF sensor-containing diguanylate cyclase5e-29128
NC_014958:66120:8100881008820601053Deinococcus maricopensis DSM 21211 chromosome, complete genomeputative GAF sensor protein1e-28127
NC_012912:2216749:2226407222640722285752169Dickeya zeae Ech1591, complete genomediguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s)8e-28124
NC_014500:2589089:2601375260137526036332259Dickeya dadantii 3937 chromosome, complete genomesensory box/GGDEF family protein3e-27122
NC_012988:769981:7831147831147862003087Methylobacterium extorquens DM4, complete genomediguanylate cyclase/phosphodiesterase4e-27122
NC_009656:2663387:2677893267789326796951803Pseudomonas aeruginosa PA7 chromosome, complete genomecyclic diguanylate phosphodiesterase/diguanylate cyclase6e-27121
NC_012721:2406874:2423173242317324242911119Burkholderia glumae BGR1 chromosome 2, complete genomePutative GAF sensor protein3e-26119
NC_007508:2941889:2955795295579529568801086Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeputative sensor protein2e-26119
NC_003919:2824000:2847359284735928483991041Xanthomonas axonopodis pv. citri str. 306, complete genomehypothetical protein5e-26118
NC_015638:3113253:3115596311559631168071212Lacinutrix sp. 5H-3-7-4 chromosome, complete genomeGAF sensor signal transduction histidine kinase8e-26117
NC_008358:263458:266410266410266973564Hyphomonas neptunium ATCC 15444, complete genomeGAF domain protein5e-25115
NC_012527:288207:2988492988493003751527Deinococcus deserti VCD115 plasmid 1, complete sequenceDiguanylate cyclase (GGDEF domain) with GAF sensor4e-24112
NC_013850:1753716:175655617565561757527972Klebsiella variicola At-22 chromosome, complete genomediguanylate cyclase with GAF sensor5e-24111
NC_010505:5525461:5546057554605755497313675Methylobacterium radiotolerans JCM 2831, complete genomemulti-sensor hybrid histidine kinase1e-23110
NC_007722:851129:8623228623228634191098Erythrobacter litoralis HTCC2594, complete genomeputative signal transduction histidine kinase with GAF domain9e-24110
NC_017080:2893224:2893224289322428955122289Phycisphaera mikurensis NBRC 102666, complete genomeputative two-component system sensor histidine kinase9e-24110
NC_010505:5525461:553695555369555537503549Methylobacterium radiotolerans JCM 2831, complete genomeputative GAF sensor protein2e-23109
NC_007677:324000:3336823336823370383357Salinibacter ruber DSM 13855, complete genomesensory box/ggdef family protein, putative3e-23108
NC_012880:2480000:2490854249085424927071854Dickeya dadantii Ech703, complete genomediguanylate cyclase with PAS/PAC and GAF sensors1e-21103
NC_012808:4235567:4248775424877542502261452Methylobacterium extorquens AM1, complete genomeputative sensory box/GGDEF family protein2e-21103
NC_011757:1288637:1288637128863712901391503Methylobacterium chloromethanicum CM4, complete genomesignal transduction histidine kinase2e-21103
NC_011757:217739:2177392177392192081470Methylobacterium chloromethanicum CM4, complete genomediguanylate cyclase with PAS/PAC and GAF sensors2e-21102
NC_014305:66500:7505375053768221770Erwinia billingiae Eb661 plasmid pEB170, complete sequenceDiguanylate cyclase/phosphodiesterase5e-21101
NC_011757:39881:6236162361648742514Methylobacterium chloromethanicum CM4, complete genomemulti-sensor hybrid histidine kinase1e-20100
NC_012988:1540587:1540587154058715421191533Methylobacterium extorquens DM4, complete genomeHWE family histidine kinase9e-21100
NC_010511:6067000:6143055614305561442241170Methylobacterium sp. 4-46 chromosome, complete genomesignal transduction histidine kinase2e-2099.4
NC_019745:2346970:2367232236723223697362505Gloeocapsa sp. PCC 7428, complete genomemulti-sensor hybrid histidine kinase3e-2099
NC_009659:1050532:108753810875381088500963Janthinobacterium sp. Marseille chromosome, complete genomediguanylate cyclase3e-2099
NC_012880:2425330:2438701243870124408572157Dickeya dadantii Ech703, complete genomediguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s)5e-2098.2
NC_014305:66500:7250972509742871779Erwinia billingiae Eb661 plasmid pEB170, complete sequenceDiguanylate cyclase/phosphodiesterase5e-2098.2
NC_011757:5102732:5112434511243451167054272Methylobacterium chloromethanicum CM4, complete genomediguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s)5e-2098.2
NC_010511:6067000:6125902612590261270741173Methylobacterium sp. 4-46 chromosome, complete genomesignal transduction histidine kinase1e-1997.4
NC_014221:3137952:3154798315479831578993102Truepera radiovictrix DSM 17093 chromosome, complete genomediguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s)2e-1996.7
NC_014483:562594:5796755796755821522478Paenibacillus polymyxa E681 chromosome, complete genomeGAF domain containing protein2e-1996.7
NC_012808:4235567:4250581425058142523351755Methylobacterium extorquens AM1, complete genomeputative phosphodiesterase2e-1996.3
NC_013757:1544348:1573944157394415758481905Geodermatophilus obscurus DSM 43160, complete genomemulti-sensor signal transduction histidine kinase5e-1995.1
NC_011757:217739:2195632195632213591797Methylobacterium chloromethanicum CM4, complete genomediguanylate phosphodiesterase with GAF sensor(s)9e-1994.4
NC_008025:1889891:1904065190406519055281464Deinococcus geothermalis DSM 11300, complete genomediguanylate cyclase with GAF sensor2e-1893.6
NC_014500:4883794:4892448489244848947692322Dickeya dadantii 3937 chromosome, complete genomesensory box protein2e-1893.2
NC_011894:6731115:6739720673972067421372418Methylobacterium nodulans ORS 2060, complete genomeputative phytochrome sensor protein5e-1891.7
NC_012912:4737703:4747041474704147493562316Dickeya zeae Ech1591, complete genomediguanylate cyclase with PAS/PAC and GAF sensors6e-1891.7
NC_014839:170000:1892931892931910741782Pantoea sp. At-9b plasmid pPAT9B02, complete sequencediguanylate cyclase/phosphodiesterase with GAF sensor2e-1790.1
NC_014561:153143:1644164434281785Pantoea vagans C9-1 plasmid pPag1, complete sequenceUncharacterized signaling protein2e-1789.7
NC_009921:593665:5936655936655970303366Frankia sp. EAN1pec, complete genomediguanylate cyclase/phosphodiesterase with GAF sensor2e-1789.7
NC_008255:3285561:3290740329074032931992460Cytophaga hutchinsonii ATCC 33406, complete genometwo-component sensor histidine kinase, sensor for arcA1e-1687.4
NC_015063:122000:1222231222231239951773Rahnella sp. Y9602 plasmid pRAHAQ02, complete sequencediguanylate phosphodiesterase1e-1687
NC_011894:6793497:6807127680712768082901164Methylobacterium nodulans ORS 2060, complete genomesignal transduction histidine kinase7e-1684.7
NC_010572:4024810:4037560403756040392991740Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein2e-1583.6
NC_014623:5350116:5368481536848153706552175Stigmatella aurantiaca DW4/3-1 chromosome, complete genomesensor protein4e-1582.4
NC_016943:2054688:2071109207110920728781770Blastococcus saxobsidens DD2, complete genomeSerine phosphatase RsbU, regulator of sigma subunit9e-1580.9
NC_012918:4648220:4663966466396646652911326Geobacter sp. M21 chromosome, complete genomeGAF sensor signal transduction histidine kinase4e-1479
NC_011146:4505821:4528565452856545298901326Geobacter bemidjiensis Bem, complete genomeGAF sensor signal transduction histidine kinase5e-1478.6
NC_009664:4423829:4552420455242045545192100Kineococcus radiotolerans SRS30216, complete genomediguanylate cyclase1e-1377
NC_013061:2247191:2249297224929722528363540Pedobacter heparinus DSM 2366, complete genomePAS sensor protein3e-1375.9
NC_011894:6793497:679901667990166799450435Methylobacterium nodulans ORS 2060, complete genomediguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s)2e-1273.6
NC_010572:188500:1921121921121935001389Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein6e-1271.6
NC_008573:195317:220472220472221449978Shewanella sp. ANA-3 plasmid 1, complete sequencediguanylate cyclase with GAF sensor2e-1066.6
NC_014323:292958:3043333043333054091077Herbaspirillum seropedicae SmR1 chromosome, complete genomediguanylate cyclase3e-0859.3
NC_009664:533021:5311625311625330241863Kineococcus radiotolerans SRS30216, complete genomemulti-sensor signal transduction histidine kinase4e-0755.8
NC_007677:117625:1211961211961243993204Salinibacter ruber DSM 13855, complete genomeutilizing regulatory protein tutC5e-0755.5