Pre_GI: BLASTP Hits

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Query: NC_003888:8613848:8616047 Streptomyces coelicolor A3(2), complete genome

Start: 8616047, End: 8617276, Length: 1230

Host Lineage: Streptomyces coelicolor; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Well-studied antiobiotic-producing bacterium. These bacteria are widely distributed in nature, especially in the soil. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes. This bacterium is a soil-dwelling filamentous organism responsible for producing more than half of the known natural antibiotics. It is a well-studied species of Streptomyces and genetically is the best known representative.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003888:8613848:8614845861484586160501206Streptomyces coelicolor A3(2), complete genomesecreted oxidoreductase2e-150532
NC_019673:3041936:3058217305821730594911275Saccharothrix espanaensis DSM 44229 complete genomeFAD dependent oxidoreductase2e-71269
NC_006361:2225072:2251558225155822527481191Nocardia farcinica IFM 10152, complete genomeputative monooxygenase9e-39161
NC_013595:5221330:5226694522669452278391146Streptosporangium roseum DSM 43021, complete genomeputative oxidoreductase transmembrane protein2e-32140
NC_013235:402819:4188974188974200721176Nakamurella multipartita DSM 44233, complete genomemonooxygenase FAD-binding2e-25117
NC_016582:5769080:5769080576908057703121233Streptomyces bingchenggensis BCW-1 chromosome, complete genomemonooxygenase FAD-binding protein9e-24111
NC_018524:4988810:5003882500388250050901209Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomeFAD binding domain protein2e-23110
NC_008601:1094041:1107723110772311089011179Francisella tularensis subsp. novicida U112, complete genomeoxidoreductase5e-23108
NC_009257:1023696:1037359103735910385371179Francisella tularensis subsp. tularensis WY96-3418 chromosome,hypothetical protein2e-22107
NC_016937:650290:6516086516086527981191Francisella tularensis subsp. tularensis TI0902 chromosome,putative oxidoreductase4e-22105
NC_016933:726197:7275157275157287051191Francisella tularensis TIGB03 chromosome, complete genomeputative oxidoreductase4e-22105
NC_008245:650243:6515616515616527511191Francisella tularensis subsp. tularensis FSC 198, complete genomemonooxygenase family protein4e-22105
NC_006570:650291:6516096516096527991191Francisella tularensis subsp. tularensis Schu 4, complete genomehypothetical protein4e-22105
NC_008686:1439328:1457084145708414582441161Paracoccus denitrificans PD1222 chromosome 1, complete sequencemonooxygenase, FAD-binding2e-20100
NC_015957:7348269:7350072735007273512141143Streptomyces violaceusniger Tu 4113 chromosome, complete genomeFAD dependent oxidoreductase2e-1997.4
NC_015312:5240653:5257175525717552583921218Pseudonocardia dioxanivorans CB1190 chromosome, complete genomemonooxygenase FAD-binding protein2e-1894.4
NC_014623:4683671:4687148468714846883621215Stigmatella aurantiaca DW4/3-1 chromosome, complete genomearomatic-ring hydroxylase2e-1790.1
NC_014210:2372813:2400179240017924013601182Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,monooxygenase FAD-binding protein5e-1789.4
NC_010338:588000:5982505982505993921143Caulobacter sp. K31, complete genomemonooxygenase FAD-binding8e-1788.6
NC_007005:98488:1023581023581037611404Pseudomonas syringae pv. syringae B728a, complete genomeFlavoprotein monooxygenase2e-1687
NC_017186:5184000:5184009518400951852201212Amycolatopsis mediterranei S699 chromosome, complete genomeFAD-dependent oxidoreductase1e-1584.7
NC_014318:5183975:5183975518397551851861212Amycolatopsis mediterranei U32 chromosome, complete genomeFAD-dependent oxidoreductase1e-1584.7
NC_010336:1670000:167174016717401672513774Francisella philomiragia subsp. philomiragia ATCC 25017, completeoxidoreductase2e-1583.6
NC_008541:1931266:1935905193590519370921188Arthrobacter sp. FB24 chromosome 1, complete sequencemonooxygenase, FAD-binding3e-1583.2
NC_005773:106000:1080961080961093611266Pseudomonas syringae pv. phaseolicola 1448A, complete genomepyridine nucleotide-disulfide oxidoreductase7e-1582
NC_016027:2580477:2594529259452925958301302Gluconacetobacter xylinus NBRC 3288, complete genomepyridine nucleotide-disulfide oxidoreductase2e-1480.5
NC_012988:731790:7595967595967608221227Methylobacterium extorquens DM4, complete genomeoxidoreductase8e-1478.6
NC_016010:1822212:1894766189476618959561191Xanthomonas axonopodis pv. citrumelo F1 chromosome, completeFAD-dependent oxidoreductase6e-1375.5
NC_009664:4423829:4537876453787645389971122Kineococcus radiotolerans SRS30216, complete genomemonooxygenase FAD-binding3e-0963.5
NC_008463:2654014:2654014265401426551621149Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative FAD-dependent monooxygenase3e-0860.1
NC_016514:1627664:1643479164347916446721194Enterobacter cloacae EcWSU1 chromosome, complete genome3-hydroxybenzoate 6-hydroxylase8e-0858.5
NC_011001:2327633:2327633232763323288111179Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative flavin-binding oxidoreductase3e-0757