Pre_GI: BLASTP Hits

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Query: NC_003888:3602753:3625695 Streptomyces coelicolor A3(2), complete genome

Start: 3625695, End: 3626462, Length: 768

Host Lineage: Streptomyces coelicolor; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Well-studied antiobiotic-producing bacterium. These bacteria are widely distributed in nature, especially in the soil. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes. This bacterium is a soil-dwelling filamentous organism responsible for producing more than half of the known natural antibiotics. It is a well-studied species of Streptomyces and genetically is the best known representative.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_021177:4258102:427109542710954271859765Streptomyces fulvissimus DSM 40593, complete genomeCobalt-precorrin-6x reductase1e-57223
NC_016631:2112175:211136921113692112178810Granulicella mallensis MP5ACTX8 chromosome, complete genomeprecorrin-6x reductase3e-39162
NC_015065:232240:245702245702246478777Acidobacterium sp. MP5ACTX9 plasmid pACIX902, complete sequenceprecorrin-6x reductase9e-39160
NC_016801:1255611:125489212548921255623732Corynebacterium diphtheriae C7 (beta) chromosome, complete genomecobalt-precorrin-6x reductase3e-37155
NC_016790:1177349:117663011766301177361732Corynebacterium diphtheriae VA01 chromosome, complete genomecobalt-precorrin-6x reductase5e-37154
NC_010511:2703684:270593727059372706698762Methylobacterium sp. 4-46 chromosome, complete genomeprecorrin-6x reductase1e-30133
NC_008595:2432184:244849224484922449226735Mycobacterium avium 104, complete genomeprecorrin-6x reductase7e-30130
NC_011758:326366:327636327636328388753Methylobacterium chloromethanicum CM4 plasmid pMCHL01, completeprecorrin-6x reductase3e-28125
NC_020829:636773:661256661256661984729Pseudomonas denitrificans ATCC 13867, complete genomecobalt-precorrin-6x reductase5e-28124
NC_006085:481231:4844604844604855001041Propionibacterium acnes KPA171202, complete genomeprecorrin-6x reductase1e-25116
NC_016516:463460:466695466695467447753Propionibacterium acnes TypeIA2 P.acn33 chromosome, completeprecorrin-6x reductase CbiJ/CobK1e-25116
NC_016511:472666:475898475898476650753Propionibacterium acnes TypeIA2 P.acn31 chromosome, completeprecorrin-6x reductase CbiJ/CobK1e-25116
NC_014039:499233:502462502462503214753Propionibacterium acnes SK137 chromosome, complete genomeprecorrin-6x reductase CbiJ/CobK1e-25116