Pre_GI: BLASTP Hits

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Query: NC_003198:331314:351764 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 351764, End: 352474, Length: 711

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016832:2612809:262554026255402626250711Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein5e-139493
NC_004631:2615908:262863926286392629349711Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative fimbrial protein5e-139493
NC_011083:338910:350370350370351080711Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative fimbrial protein9e-139492
NC_006905:326517:346343346343347053711Salmonella enterica subsp. enterica serovar Choleraesuis strputative fimbrial protein5e-138489
NC_011094:334267:352648352648353358711Salmonella enterica subsp. enterica serovar Schwarzengrund strfimbrial protein1e-137488
NC_011147:2536000:254890025489002549610711Salmonella enterica subsp. enterica serovar Paratyphi A strfimbrial protein9e-137485
NC_006511:2540500:255336425533642554074711Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative fimbrial protein9e-137485
NC_016835:405482:418827418827419549723Rahnella aquatilis CIP 78.65 = ATCC 33071 plasmid pRahaq201,P pilus assembly protein, chaperone PapD3e-34144
NC_020181:1317647:132364913236491324398750Enterobacter aerogenes EA1509E, complete genomeAlpha-fimbriae chaperone protein3e-30132
NC_015061:3801927:382109838210983821841744Rahnella sp. Y9602 chromosome, complete genomehypothetical protein7e-29127
NC_016818:3816000:383267438326743833417744Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeP pilus assembly protein, chaperone PapD1e-27123
NC_005773:866157:910262910262910975714Pseudomonas syringae pv. phaseolicola 1448A, complete genomeperiplasmic chaperone protein, putative2e-24112
NC_009788:16360:351103511035826717Escherichia coli E24377A plasmid pETEC_73, complete sequencehypothetical protein8e-24110
NC_017047:3869350:388874738887473889232486Rahnella aquatilis HX2 chromosome, complete genomeputative fimbrial protein TcfA2e-2099
NC_014541:1414627:142800214280021428643642Ferrimonas balearica DSM 9799 chromosome, complete genomeputative CFA/I fimbrial subunit A5e-1374.7
NC_015224:279037:288792288792289475684Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,hypothetical protein5e-0754.7