Pre_GI: BLASTP Hits

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Query: NC_003198:331314:348345 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 348345, End: 348476, Length: 132

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016832:2612809:262953726295372629668132Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein1e-1891.7
NC_004631:2615908:263263726326372632768132Salmonella enterica subsp. enterica serovar Typhi Ty2, complete1e-1891.7
NC_012125:326909:342791342791342922132Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein8e-1785.9
NC_011147:2536000:255289825528982553029132Salmonella enterica subsp. enterica serovar Paratyphi A str1e-1685.1
NC_011149:309556:329577329577329708132Salmonella enterica subsp. enterica serovar Agona str. SL483,TnpA1e-1685.1
NC_010102:2762304:276889527688952769026132Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-1684.7
NC_016857:329849:347754347754347885132Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74Putative transposase2e-1684.7
NC_011080:333121:352787352787352918132Salmonella enterica subsp. enterica serovar Newport str. SL254,TnpA3e-1684
NC_011094:334267:349221349221349352132Salmonella enterica subsp. enterica serovar Schwarzengrund strTnpA protein5e-1683.2
NC_016831:2667561:267598726759872676118132Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein7e-1682.4
NC_011294:311796:327834327834327941108Salmonella enterica subsp. enterica serovar Enteritidis str8e-1269.3
NC_016860:332087:34832534832534840884Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein2e-0754.3