Pre_GI: BLASTP Hits

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Query: NC_003198:331314:339076 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 339076, End: 339336, Length: 261

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009953:1484000:1484050148405014918977848Salinispora arenicola CNS-205 chromosome, complete genomeYD repeat-containing protein4e-1167
NC_010002:4930865:49377654937765494883411070Delftia acidovorans SPH-1, complete genomeYD repeat protein2e-1064.7
NC_018681:1021063:1028576102857610299881413Nocardia brasiliensis ATCC 700358 chromosome, complete genomehypothetical protein2e-1064.7
NC_008767:451983:4742504742504766372388Neisseria meningitidis FAM18, complete genomeputative Hemagglutinin/hemolysin-related protein4e-0960.1
NC_017515:1744500:1769174176917417753716198Neisseria meningitidis M04-240196 chromosome, complete genomehemagglutinin family protein4e-0960.1
NC_017513:449949:4724374724374748242388Neisseria meningitidis G2136 chromosome, complete genomehypothetical protein4e-0960.1
NC_017512:425085:4384364384364444836048Neisseria meningitidis WUE 2594, complete genomehemagglutinin/hemolysin-related protein TpsA6e-0959.7
NC_003116:658879:6728836728836789306048Neisseria meningitidis Z2491, complete genomehypothetical protein6e-0959.7
NC_017501:543000:552367552367553146780Neisseria meningitidis 8013, complete genomeputative hemagglutinin/hemolysin-related protein6e-0959.7
NC_016935:7872425:7905333790533379064091077Paenibacillus mucilaginosus 3016 chromosome, complete genomeRhs core protein2e-0858.2
NC_016627:2664419:2691614269161426937102097Clostridium clariflavum DSM 19732 chromosome, complete genomeRHS repeat-associated core domain-containing protein1e-0755.1
NC_011770:3049830:30498303049830306676716938Pseudomonas aeruginosa LESB58, complete genomehypothetical protein1e-0755.1
NC_012581:2178000:2184394218439421856291236Bacillus anthracis str. CDC 684 chromosome, complete genomehypothetical protein2e-0754.3
NC_015856:2646816:26602012660201267066110461Collimonas fungivorans Ter331 chromosome, complete genomepolymorphic membrane protein, Filamentous hemagglutinin/Adhesin3e-0753.9
NC_009074:1092000:1092565109256511019999435Burkholderia pseudomallei 668 chromosome I, complete sequencecell surface protein4e-0753.5
NC_009076:1102500:1102888110288811123139426Burkholderia pseudomallei 1106a chromosome I, complete sequencecell surface protein6e-0752.8
NC_007434:1322500:1322768132276813321639396Burkholderia pseudomallei 1710b chromosome I, complete sequencepossible adhesin/hemolysin7e-0752.8
NC_014335:2009662:202775520277552028240486Bacillus cereus biovar anthracis str. CI chromosome, completehypothetical protein8e-0752.4