Pre_GI: BLASTP Hits

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Query: NC_003197:1753663:1766967 Salmonella typhimurium LT2, complete genome

Start: 1766967, End: 1767221, Length: 255

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016863:1711832:172513717251371725391255Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative outer membrane lipoprotein8e-36149
NC_016857:1709695:172382117238211724075255Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative outer membrane lipoprotein8e-36149
NC_016810:1709695:172382117238211724075255Salmonella enterica subsp. enterica serovar Typhimurium strputative lipoprotein8e-36149
NC_006905:1766000:178009617800961780350255Salmonella enterica subsp. enterica serovar Choleraesuis strputative outer membrane lipoprotein2e-35147
NC_016860:1752000:176465817646581764894237Salmonella enterica subsp. enterica serovar Typhimurium strputative outer membrane lipoprotein6e-32135
NC_016856:1763640:177694517769451777181237Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative outer membrane lipoprotein6e-32135
NC_004631:1623511:163764216376421637878237Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative lipoprotein2e-31134
NC_003198:1336894:134330413433041343540237Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative lipoprotein2e-31134
NC_011147:1267005:127341312734131273649237Salmonella enterica subsp. enterica serovar Paratyphi A strlipoprotein1e-30131
NC_006511:1273162:127957012795701279806237Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative lipoprotein1e-30131
NC_011094:1726000:174014017401401740376237Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein1e-30131
NC_017046:1709578:172370417237041723865162Salmonella enterica subsp. enterica serovar Typhimurium str. 798lipoprotein2e-21101
NC_011149:1429523:143600714360071436168162Salmonella enterica subsp. enterica serovar Agona str. SL483,putative outer membrane lipoprotein5e-2199.8
NC_011080:1750000:176332017633201763481162Salmonella enterica subsp. enterica serovar Newport str. SL254,putative outer membrane lipoprotein5e-2199.8