Pre_GI: BLASTP Hits

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Query: NC_003197:1611302:1621409 Salmonella typhimurium LT2, complete genome

Start: 1621409, End: 1622650, Length: 1242

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017046:1574057:1578146157814615793871242Salmonella enterica subsp. enterica serovar Typhimurium str. 798multidrug efflux protein0733
NC_016863:1575488:1579577157957715808181242Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative multidrug efflux protein0733
NC_016860:1614280:1619099161909916203401242Salmonella enterica subsp. enterica serovar Typhimurium strputative multidrug efflux protein0733
NC_016857:1576636:1578262157826215795031242Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative multidrug efflux protein0733
NC_016856:1621279:1631386163138616326271242Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative multidrug efflux protein0733
NC_016810:1576636:1578262157826215795031242Salmonella enterica subsp. enterica serovar Typhimurium strputative multidrug efflux protein0733
NC_011094:1584038:1588857158885715900981242Salmonella enterica subsp. enterica serovar Schwarzengrund strmajor facilitator superfamily protein0727
NC_003198:1463253:1472365147236514736061242Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative multidrug efflux protein0723
NC_011149:1578451:1592785159278515940261242Salmonella enterica subsp. enterica serovar Agona str. SL483,major facilitator superfamily MFS_10704
NC_015761:1488807:1498916149891615001541239Salmonella bongori NCTC 12419, complete genomemultidrug efflux protein5e-176617
NC_003919:5056650:5075447507544750767121266Xanthomonas axonopodis pv. citri str. 306, complete genometetracycline-efflux transporter2e-1687.4
NC_005042:1719055:1719055171905517203141260Prochlorococcus marinus subsp. marinus str. CCMP1375, completePermease of the major facilitator superfamily1e-1584.3
NC_012032:448161:4525394525394537501212Chloroflexus sp. Y-400-fl, complete genomemajor facilitator superfamily MFS_12e-1377.8
NC_009838:81913:8960389603907931191Escherichia coli APEC O1 plasmid pAPEC-O1-R, complete sequenceTetA2e-1377
NC_010410:3606826:3671432367143236726071176Acinetobacter baumannii AYE, complete genomeTetracycline resistance protein, class G (TETA(G))1e-1274.7
NC_020418:448687:4588664588664600711206Morganella morganii subsp. morganii KT, complete genomemajor facilitator superfamily protein2e-1170.5
NC_003384:157158:1779351779351791401206Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmidtetracycline resistance protein2e-1170.5
NC_011083:4547825:4606940460694046081451206Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,tetracycline resistance protein, class B2e-1170.5
NC_013365:92973:9669896698979031206Escherichia coli O111:H- str. 11128 plasmid pO111_1, completetetracycline resistance protein TetB2e-1170.5
NC_016860:4055117:4063086406308640642911206Salmonella enterica subsp. enterica serovar Typhimurium strtetracycline resistance protein2e-1170.5
NC_017328:1075535:1106058110605811072631206Shigella flexneri 2002017 chromosome, complete genomeTetracycline resistance protein, class B (TetA(B)) (Metal- tetracycline/H(+) antiporter)2e-1170.5
NC_017328:1075535:1119452111945211206571206Shigella flexneri 2002017 chromosome, complete genomeTetracycline resistance protein, class B (TetA(B)) (Metal- tetracycline/H(+) antiporter)2e-1170.5
NC_017171:280762:2856542856542868891236Acinetobacter baumannii MDR-ZJ06 chromosome, complete genomeTetracycline resistance protein, class B (TETA(B) ) (Metal-tetracycline/H(+) antiporter)2e-1170.5
NC_017387:247462:2876772876772888701194Acinetobacter baumannii TCDC-AB0715 chromosome, complete genometetracycline resistance protein, class G (TETA(G))2e-1170.5
NC_011749:34056:4355043550448031254Escherichia coli UMN026 plasmid p1ESCUM, complete sequencetetracycline efflux transporter3e-1170.1
NC_011748:4950723:4974007497400749752601254Escherichia coli 55989, complete genomeTetracycline resistance protein, class B (TETA(B) ) (Metal-tetracycline/H(+) antiporter)3e-1170.1
CU928145:4950723:4974007497400749752601254Escherichia coli 55989 chromosome, complete genomeTetracycline resistance protein, class B (TETA(B) ) (Metal-tetracycline/H(+) antiporter)3e-1170.1
NC_019977:1621939:1637162163716216384751314Methanomethylovorans hollandica DSM 15978, complete genomearabinose efflux permease family protein3e-1169.7
NC_010939:405477:4158074158074169461140Actinobacillus pleuropneumoniae serovar 7 str. AP76, completeTetracycline resistance protein, class G5e-1169.3
NC_014976:684000:7008387008387020401203Bacillus subtilis BSn5 chromosome, complete genomeefflux transporter4e-1169.3
NC_012668:3037345:3048365304836530496391275Vibrio cholerae MJ-1236 chromosome 1, complete sequenceTetA1e-1068.2
NC_010410:3606826:3641859364185936431331275Acinetobacter baumannii AYE, complete genomeTetracycline resistance protein, class A (TETA(A))1e-1068.2
NC_017195:2498113:2523659252365925248611203Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completemultidrug resistance protein 22e-1067.4
NC_000964:2702376:2716199271619927174011203Bacillus subtilis subsp. subtilis str. 168, complete genomemultidrug-efflux transporter2e-1067.4
NC_016047:2658000:2682573268257326837751203Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completemultidrug resistance protein 22e-1067
NC_005070:2374850:2395742239574223970401299Synechococcus sp. WH 8102, complete genomemultidrug efflux transporter, MFS family3e-1066.6
NC_019896:1483073:1508442150844215096441203Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completeMultidrug resistance protein 24e-1066.2
NC_020244:2509000:2531624253162425328261203Bacillus subtilis XF-1, complete genomeefflux transporter4e-1066.2
NC_011586:268927:2922162922162933431128Acinetobacter baumannii AB0057 chromosome, complete genometetracycline resistance protein, class A8e-1065.1
NC_003909:927955:9473589473589485601203Bacillus cereus ATCC 10987, complete genomemultidrug resistance protein1e-0965.1
NC_009349:3396:4109410953261218Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, completetetracycline resistance protein TetA(E)1e-0964.7
NC_013766:906550:9065509065509077701221Listeria monocytogenes 08-5578 chromosome, complete genomehypothetical protein3e-0963.2
NC_003210:870587:8705878705878718071221Listeria monocytogenes EGD-e, complete genomehypothetical protein3e-0963.2
NC_012962:3060063:3078973307897330802381266Photorhabdus asymbiotica, complete genomesimilar to tetracycline-efflux transporter5e-0962.8
NC_015387:2072237:2085508208550820867041197Marinithermus hydrothermalis DSM 14884 chromosome, complete genomemajor facilitator superfamily MFS_14e-0962.8
NC_016935:2567039:2618956261895626201641209Paenibacillus mucilaginosus 3016 chromosome, complete genomemultidrug resistance protein1e-0861.6
UCMB5137:1:2696926969281711203Bacillus atrophaeus UCMB-5137efflux transporter2e-0860.5
NC_015690:2039215:2069428206942820706361209Paenibacillus mucilaginosus KNP414 chromosome, complete genomemultidrug resistance protein2e-0860.5
NC_005126:2222000:2225254222525422265191266Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein4e-0859.7
NC_009481:2081500:2086183208618320873761194Synechococcus sp. WH 7803 chromosome, complete genomemajor facilitator superfamily permease7e-0858.9
NC_002932:937157:9410909410909423581269Chlorobium tepidum TLS, complete genomedrug resistance protein, putative2e-0757.8
NC_011832:1399446:1399446139944614006481203Candidatus Methanosphaerula palustris E1-9c, complete genomemajor facilitator superfamily MFS_13e-0757
NC_015161:2060369:2064492206449220657331242Deinococcus proteolyticus MRP chromosome, complete genomemajor facilitator superfamily MFS_13e-0757
NC_010519:1963256:1979596197959619807981203Haemophilus somnus 2336 chromosome, complete genomemajor facilitator transporter5e-0756.2
NC_005823:2840000:2861270286127028624991230Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130permease5e-0755.8
NC_014761:1981435:1999855199985520010391185Oceanithermus profundus DSM 14977 chromosome, complete genomemajor facilitator superfamily mfs_13e-0653.1
NC_018876:863314:8633148633148646391326Methanolobus psychrophilus R15 chromosome, complete genomedrug-efflux transporter5e-0652.8