Pre_GI: BLASTP Hits

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Query: NC_002947:5386489:5396987 Pseudomonas putida KT2440, complete genome

Start: 5396987, End: 5398717, Length: 1731

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was derived from a toluene-degrading isolate, Pseudomonas arvilla strain mt-2 (renamed Pseudomonas putida mt-2), by loss of its plasmid. Common environmental bacterium. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009656:6224221:6241571624157162432141644Pseudomonas aeruginosa PA7 chromosome, complete genometype I restriction-modification system subunit S6e-88325
NC_017986:1885613:1908432190843219101171686Pseudomonas putida ND6 chromosome, complete genomerestriction modification system DNA specificity subunit2e-87323
NC_009943:940835:9510329510329527651734Candidatus Desulfococcus oleovorans Hxd3, complete genomerestriction modification system DNA specificity domain1e-86321
NC_014394:3114648:3132320313232031340411722Gallionella capsiferriformans ES-2 chromosome, complete genomerestriction modification system DNA specificity domain1e-74281
NC_016745:1548426:1556423155642315582191797Oceanimonas sp. GK1 chromosome, complete genometype I restriction-modification system specificity7e-63242
NC_010170:4196197:4209964420996442123572394Bordetella petrii, complete genometype I restriction-modification system, S subunit2e-62240
NC_010468:4059436:4070347407034740721041758Escherichia coli ATCC 8739, complete genomerestriction modification system DNA specificity domain3e-60233
NC_014965:997344:1006320100632010080921773Vibrio vulnificus MO6-24/O chromosome I, complete sequencetype I restriction-modification system, DNA-methyltransferase subunit M5e-58225
NC_004603:370320:3874733874733892241752Vibrio parahaemolyticus RIMD 2210633 chromosome I, completeputative HsdS polypeptide, part of CfrA family6e-58225
NC_010995:764567:7715967715967739832388Cellvibrio japonicus Ueda107, complete genometype I restriction-modification system, S subunit3e-56220
NC_014306:4376012:4402909440290944046391731Erwinia billingiae Eb661, complete genomeType I restriction-modification system, S subunit2e-55217
NC_009665:2352528:2352528235252823543781851Shewanella baltica OS185 chromosome, complete genomerestriction modification system DNA specificity subunit4e-51203
NC_015633:2801321:2804068280406828058431776Vibrio anguillarum 775 chromosome chromosome I, complete sequencetype I restriction-modification system specificity1e-50201
NC_015677:1282865:1291978129197812937441767Ramlibacter tataouinensis TTB310 chromosome, complete genometype I restriction- modification, DNA specificity subunit2e-48194
NC_008639:1573971:1587158158715815888311674Chlorobium phaeobacteroides DSM 266, complete genomerestriction modification system DNA specificity domain1e-47191
NC_009925:2240871:2242037224203722437581722Acaryochloris marina MBIC11017, complete genometype I restriction-modification system S subunit5e-45182
NC_014034:1418681:1425744142574414274261683Rhodobacter capsulatus SB1003 chromosome, complete genometype I restriction-modification system RcaSBIIIP subunit S5e-44179
NC_011884:1029328:1038008103800810397261719Cyanothece sp. PCC 7425, complete genomerestriction modification system DNA specificity domain protein6e-38159
NC_010337:616304:6289866289866306021617Heliobacterium modesticaldum Ice1, complete genometype i restriction modification DNA specificity domain4e-34146
NC_011899:2165814:2178735217873521804321698Halothermothrix orenii H 168, complete genomerestriction modification system DNA specificity domain protein4e-34146
NC_020541:2551539:2562003256200325637091707Rhodanobacter sp. 2APBS1, complete genomerestriction endonuclease S subunit1e-32141
NC_009076:75535:915959159592542948Burkholderia pseudomallei 1106a chromosome I, complete sequenceRestriction endonuclease S subunits6e-28126
NC_009715:1470419:1483709148370914852951587Campylobacter curvus 525.92 chromosome, complete genomeputative type I restriction-modification system, S subunit1e-24115
NC_014363:1902868:1912983191298319145601578Olsenella uli DSM 7084 chromosome, complete genomerestriction modification system DNA specificity domain protein6e-24112
NC_013440:3813132:3832106383210638333771272Haliangium ochraceum DSM 14365, complete genomerestriction modification system DNA specificity domain protein4e-22107
NC_004347:4441110:4439626443962644411131488Shewanella oneidensis MR-1, complete genometype I restriction-modification system, S subunit1e-21105
NC_014727:368698:3798813798813812961416Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,type i site-specific deoxyribonuclease chain s8e-22105
NC_015663:2090442:2112256211225621135961341Enterobacter aerogenes KCTC 2190 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein7e-1995.9
NC_003228:1732497:1732497173249717338401344Bacteroides fragilis NCTC 9343, complete genomeputative type I restriction enzyme specificity protein7e-1995.9
NC_014655:130636:1415751415751430621488Leadbetterella byssophila DSM 17132 chromosome, complete genomerestriction modification system DNA specificity domain3e-1894
NC_004369:256262:2803292803292815581230Corynebacterium efficiens YS-314, complete genomeputative restriction enzyme subunit S6e-1892.8
NC_002607:81452:8916089160905871428Halobacterium sp. NRC-1, complete genomeRmeS1e-1791.7
NC_010364:84900:9158891588930151428Halobacterium salinarum R1, complete genometype I site-specific deoxyribonuclease subunit rmeS1e-1791.7
NC_005363:3562205:3576704357670435779571254Bdellovibrio bacteriovorus HD100, complete genometype I restriction-modification system, S subunit5e-1789.7
NC_013169:1410384:1418952141895214200161065Kytococcus sedentarius DSM 20547, complete genomehypothetical protein1e-1688.6
NC_014008:1463795:1483479148347914848221344Coraliomargarita akajimensis DSM 45221 chromosome, complete genomerestriction modification system DNA specificity domain protein2e-1688.2
NC_011666:1661491:1673298167329816746171320Methylocella silvestris BL2, complete genometype I restriction enzyme2e-1687.8
NC_007086:3805390:3812748381274838140641317Xanthomonas campestris pv. campestris str. 8004, complete genomeputative restriction endonuclease S subunits3e-1687
NC_010688:3740399:3747058374705837483741317Xanthomonas campestris pv. campestris, complete genomeType I site-specific deoxyribonuclease (specificity subunit)3e-1687
NC_013730:3729626:3747015374701537485771563Spirosoma linguale DSM 74, complete genomerestriction modification system DNA specificity domain protein7e-1685.9
NC_015873:63487:6196561965634941530Megasphaera elsdenii DSM 20460, complete genomerestriction modification system DNA specificity domain protein1e-1585.5
NC_018748:1443176:1444217144421714455061290Emticicia oligotrophica DSM 17448 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein9e-1685.5
NC_015500:2866027:2878192287819228801321941Treponema brennaborense DSM 12168 chromosome, complete genomeprotein of unknown function DUF453e-1584
NC_003901:2727361:2735284273528427365041221Methanosarcina mazei Go1, complete genometype I restriction-modification system specificity subunit3e-1584
NC_015571:2002489:2035156203515620365861431Porphyromonas gingivalis TDC60, complete genometype I restriction-modification system8e-1582.4
NC_015711:8852850:8861468886146888629851518Myxococcus fulvus HW-1 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein1e-1482
NC_013862:27991:4442444258031362Allochromatium vinosum DSM 180 plasmid pALVIN02, complete sequencerestriction modification system DNA specificity domain protein3e-1480.5
NC_014216:3003347:3007974300797430119703997Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomehypothetical protein8e-1479.3
NC_018528:697553:696817696817697560744Lactobacillus helveticus R0052 chromosome, complete genomerestriction modification system DNA specificity subunit2e-1274.7
NC_015703:3880903:3901289390128939026681380Runella slithyformis DSM 19594 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein6e-1272.8
NC_013169:2351475:2360619236061923618751257Kytococcus sedentarius DSM 20547, complete genomehypothetical protein3e-1170.9
NC_011144:1073944:1085756108575610872191464Phenylobacterium zucineum HLK1, complete genometype I restriction-modification system, S subunit4e-1170.1
NC_010814:1441327:1458977145897714603201344Geobacter lovleyi SZ, complete genomerestriction modification system DNA specificity domain1e-1068.6
NC_016943:4799915:481102148110214811941921Blastococcus saxobsidens DD2, complete genomeRestriction endonuclease S subunit2e-1067.4
NC_009328:814530:8393888393888409171530Geobacillus thermodenitrificans NG80-2 chromosome, complete genometype I specificity subunit HsdS8e-1065.9
NC_007925:4060635:4066717406671740680991383Rhodopseudomonas palustris BisB18, complete genometype I restriction enzyme StySPI specificity protein8e-1065.9
NC_016816:1137904:1156994115699411586911698Pantoea ananatis LMG 5342, complete genometype I restriction modification DNA specificity domain protein9e-1065.9
NC_014363:1902868:1910148191014819115841437Olsenella uli DSM 7084 chromosome, complete genomerestriction modification system DNA specificity domain protein9e-1065.9
NC_009712:1008000:1014213101421310155861374Candidatus Methanoregula boonei 6A8, complete genomerestriction modification system DNA specificity subunit1e-0965.1
NC_011283:5011497:5019495501949550208621368Klebsiella pneumoniae 342 chromosome, complete genometype I restriction modification DNA specificity domain protein3e-0963.9
NC_012108:2194251:2194251219425121955311281Desulfobacterium autotrophicum HRM2, complete genomeHsdS24e-0963.5
NC_014216:3003347:300606530060653006445381Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomerestriction modification system DNA specificity subunit6e-0962.8
NC_008751:1043269:1053152105315210549391788Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomerestriction modification system DNA specificity domain2e-0861.6
NC_009429:401500:422289422289422549261Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01, completeType I restriction-modification system methyltransferase subunit-like protein2e-0861.6
NC_012914:5446366:5451995545199554533651371Paenibacillus sp. JDR-2, complete genomerestriction modification system DNA specificity domain protein2e-0861.6
NC_008312:3728329:3735023373502337362311209Trichodesmium erythraeum IMS101, complete genomerestriction modification system DNA specificity domain2e-0861.2
NC_015571:2002489:2036581203658120381431563Porphyromonas gingivalis TDC60, complete genometype I restriction-modification system, subunit S6e-0859.7
NC_013161:4093322:4102957410295741043271371Cyanothece sp. PCC 8802, complete genomerestriction modification system DNA specificity domain protein1e-0758.9
NC_011146:4070000:4081856408185640830431188Geobacter bemidjiensis Bem, complete genomerestriction modification system DNA specificity domain2e-0757.8
NC_014814:2588628:2629651262965126309191269Mycobacterium sp. Spyr1 chromosome, complete genomerestriction endonuclease S subunit2e-0757.8
NC_012587:128845:1486971486971501871491Rhizobium sp. NGR234, complete genomeputative restriction endonuclease type I, S subunit3e-0757.4
NC_006361:2920028:2925616292561629268001185Nocardia farcinica IFM 10152, complete genomeputative restriction-modification system specificity determinant3e-0757.4
NC_014550:2562053:2590617259061725918701254Arthrobacter arilaitensis Re117, complete genometype I restriction-modification system specificity subunit4e-0757
NC_014206:411143:4175314175314187451215Geobacillus sp. C56-T3 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein5e-0756.6
NC_010003:1126800:1142463114246311437521290Petrotoga mobilis SJ95, complete genomerestriction modification system DNA specificity domain6e-0756.2
NC_016610:2077603:2094664209466420960731410Tannerella forsythia ATCC 43037 chromosome, complete genometype I restriction modification DNA specificity domain-containing protein9e-0755.8
NC_008740:257434:2748562748562762411386Marinobacter aquaeolei VT8, complete genomerestriction modification system DNA specificity domain1e-0655.5
NC_018691:3437821:3449748344974834512081461Alcanivorax dieselolei B5 chromosome, complete genomeRestriction modification system DNA specificity domain protein2e-0654.7
NC_011901:1860887:1891507189150718927661260Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completetype I restriction-modification system specificity subunit3e-0654.3
NC_015572:4618467:4638997463899746404661470Methylomonas methanica MC09 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein4e-0653.9