Pre_GI: BLASTP Hits

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Query: NC_002947:2589951:2611059 Pseudomonas putida KT2440, complete genome

Start: 2611059, End: 2615768, Length: 4710

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was derived from a toluene-degrading isolate, Pseudomonas arvilla strain mt-2 (renamed Pseudomonas putida mt-2), by loss of its plasmid. Common environmental bacterium. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011757:4293000:4304134430413443082284095Methylobacterium chloromethanicum CM4, complete genomeTransglycosylase domain protein9e-42173
NC_016627:793583:793583793583794260678Clostridium clariflavum DSM 19732 chromosome, complete genomelytic murein transglycosylase7e-1790.9
NC_014376:3671441:368650836865083687230723Clostridium saccharolyticum WM1 chromosome, complete genomeLytic transglycosylase catalytic7e-1687.8
NC_007644:1638083:164380416438041644424621Moorella thermoacetica ATCC 39073, complete genomeLytic transglycosylase, catalytic5e-1584.7
NC_009012:3224000:323867632386763239362687Clostridium thermocellum ATCC 27405, complete genomeLytic transglycosylase, catalytic6e-1584.7
NC_009664:533021:5479845479845490901107Kineococcus radiotolerans SRS30216, complete genomeLytic transglycosylase catalytic2e-1482.8
NC_009483:5113729:512062851206285121383756Geobacter uraniireducens Rf4 chromosome, complete genomelytic transglycosylase2e-1379.3
NC_009092:4337617:435105243510524351783732Shewanella loihica PV-4, complete genomeLytic transglycosylase, catalytic2e-1379.3
NC_013093:2599591:259959125995912600574984Actinosynnema mirum DSM 43827, complete genomeLytic transglycosylase catalytic9e-1377.4
NC_011772:1575674:159336415933641594149786Bacillus cereus G9842, complete genometransglycosylase, SLT family3e-1275.5
NC_007511:1147696:1170317117031711714201104Burkholderia sp. 383 chromosome 2, complete sequenceLytic transglycosylase, catalytic6e-1274.7
NC_010511:2079744:2132561213256121335831023Methylobacterium sp. 4-46 chromosome, complete genomelytic transglycosylase7e-1274.3
NC_014311:978761:9942009942009961671968Ralstonia solanacearum PSI07 chromosome, complete genomehypothetical protein8e-1274.3
NC_000964:2146000:2248350224835022552076858Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein1e-1173.6
NC_010511:6067000:6100598610059861016201023Methylobacterium sp. 4-46 chromosome, complete genomelytic transglycosylase2e-1172.8
NC_014219:1736000:175182117518211752510690Bacillus selenitireducens MLS10 chromosome, complete genomeLytic transglycosylase catalytic2e-1172.8
NC_007760:4055860:409261540926154093244630Anaeromyxobacter dehalogenans 2CP-C, complete genomeLytic transglycosylase, catalytic3e-1172
NC_014972:544146:547516547516548247732Desulfobulbus propionicus DSM 2032 chromosome, complete genomelytic transglycosylase catalytic4e-1171.6
NC_009675:4281249:429915642991564299785630Anaeromyxobacter sp. Fw109-5 chromosome, complete genomelytic transglycosylase catalytic subunit4e-1171.6
NC_011891:4104000:412519141251914125820630Anaeromyxobacter dehalogenans 2CP-1, complete genomeLytic transglycosylase catalytic1e-1070.1
NC_015425:2277570:229041522904152291074660Clostridium botulinum BKT015925 chromosome, complete genomelytic murein transglycosylase2e-1069.3
NC_013173:1231213:123625212362521236854603Desulfomicrobium baculatum DSM 4028, complete genomeLytic transglycosylase catalytic3e-1069.3
NC_013194:963735:997671997671998336666Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeLytic transglycosylase catalytic3e-1068.9
NC_014972:137184:158025158025158633609Desulfobulbus propionicus DSM 2032 chromosome, complete genomelytic transglycosylase catalytic8e-1067.4
NC_010814:2217153:224462722446272245265639Geobacter lovleyi SZ, complete genomeLytic transglycosylase catalytic9e-1067.4
NC_011894:2184956:220462022046202205339720Methylobacterium nodulans ORS 2060, complete genomeLytic transglycosylase catalytic1e-0967
NC_013792:109203:1174391174391196102172Bacillus pseudofirmus OF4 plasmid pBpOF4-01, complete sequenceSPbeta phage protein; lytic transglycosylase1e-0967
NC_008593:2020473:203784220378422038495654Clostridium novyi NT, complete genomelytic murein transglycosylase, putative3e-0965.5
NC_016845:1285435:1323839132383913257641926Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,transglycosylase4e-0965.1
NC_017243:1229597:124215712421571242882726Brachyspira intermedia PWS/A chromosome, complete genomelytic transglycosylase6e-0964.7
NC_009483:2854500:287564628756462876242597Geobacter uraniireducens Rf4 chromosome, complete genomelytic transglycosylase6e-0964.7
NC_014121:3627588:3644135364413536459041770Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein5e-0964.7
NC_020126:8984500:898707289870728987959888Myxococcus stipitatus DSM 14675, complete genometransglycosylase SLT domain-containing protein7e-0964.3
NC_016845:2306744:2309391230939123113942004Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,lytic transglycosylase, catalytic7e-0964.3
NC_017179:281069:299909299909300577669Clostridium difficile BI1, complete genometransglycosylase8e-0964.3
NC_015437:697051:7302427302427320621821Selenomonas sputigena ATCC 35185 chromosome, complete genomeLytic transglycosylase catalytic9e-0963.9
NC_010172:57500:9066790667917581092Methylobacterium extorquens PA1, complete genomeLytic transglycosylase catalytic9e-0963.9
NC_018604:1045774:105879510587951059511717Brachyspira pilosicoli WesB complete genomelytic transglycosylase1e-0863.9
NC_012225:787737:794109794109794822714Brachyspira hyodysenteriae WA1, complete genomelytic transglycosylase2e-0863.2
NC_014150:446359:453240453240453983744Brachyspira murdochii DSM 12563 chromosome, complete genomeLytic transglycosylase catalytic2e-0863.2
NC_014733:1073540:107696010769601077583624Methylovorus sp. MP688 chromosome, complete genomelytic transglycosylase catalytic1e-0863.2
NC_015572:1421782:143602314360231436871849Methylomonas methanica MC09 chromosome, complete genomelytic transglycosylase catalytic subunit2e-0862.8
NC_004757:2412161:241216124121612413066906Nitrosomonas europaea ATCC 19718, complete genomeSLT domain3e-0862
NC_015318:1455444:147780914778091478426618Hippea maritima DSM 10411 chromosome, complete genomelytic transglycosylase catalytic subunit4e-0862
NC_011283:4170369:4194180419418041961051926Klebsiella pneumoniae 342 chromosome, complete genometransglycosylase SLT domain-containing protein4e-0861.6
NC_011660:1889504:189604518960451896713669Listeria monocytogenes HCC23 chromosome, complete genometransglycosylase5e-0861.6
NC_017030:8766757:877403587740358774856822Corallococcus coralloides DSM 2259 chromosome, complete genometransglycosylase7e-0861.2
NC_020211:2123819:2123819212381921258252007Serratia marcescens WW4, complete genomelytic transglycosylase catalytic subunit1e-0760.5
NC_019908:982471:989710989710990426717Brachyspira pilosicoli P43/6/78 chromosome, complete genomelytic transglycosylase1e-0760.5
NC_014330:2268773:228178822817882282501714Brachyspira pilosicoli 95/1000 chromosome, complete genomelytic transglycosylase1e-0760.5
NC_014220:1858747:187483218748321875473642Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeLytic transglycosylase catalytic1e-0760.5
NC_018607:1803500:180877418087741809490717Brachyspira pilosicoli B2904 chromosome, complete genomelytic transglycosylase2e-0759.3
NC_015850:1155376:117330311733031173821519Acidithiobacillus caldus SM-1 chromosome, complete genomelytic transglycosylase3e-0758.9
NC_008555:696217:712724712724713407684Listeria welshimeri serovar 6b str. SLCC5334, complete genometransglycosylase, SLT family8e-0757.8
NC_013173:1356526:137746913774691377996528Desulfomicrobium baculatum DSM 4028, complete genomeLytic transglycosylase catalytic6e-0757.8
NC_007517:2165657:217968121796812180292612Geobacter metallireducens GS-15, complete genomeLytic transglycosylase, catalytic1e-0657
NC_014643:1123601:115253711525371153277741Rothia dentocariosa ATCC 17931 chromosome, complete genomeSLT family transglycosylase4e-0655.5
NC_013891:640784:657261657261657935675Listeria seeligeri serovar 1/2b str. SLCC3954, complete genometransglycosylase, SLT family4e-0655.5
NC_015850:2048251:211015521101552111087933Acidithiobacillus caldus SM-1 chromosome, complete genomelytic transglycosylase5e-0655.1
NC_014834:959986:959986959986960753768Rhodopseudomonas palustris DX-1 chromosome, complete genomelytic transglycosylase7e-0654.3
NC_010102:1829357:1849885184988518519662082Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein8e-0654.3