Pre_GI: BLASTP Hits

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Query: NC_002944:1781905:1785511 Mycobacterium avium subsp. paratuberculosis K-10, complete genome

Start: 1785511, End: 1786188, Length: 678

Host Lineage: Mycobacterium avium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from a diary herd in Wisconsin, USA in the 1970's. Environmental organism which causes infections in birds and humans. This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, Mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. Mycobacterium avium is ubiquitous in the environment, and can be found in stagnant waters and soils. This organism causes tuberculosis in birds and disseminated infections in immunocompromized humans (the elderly, children, and especially patients with AIDS). Infection results in a characteristic pulmonary disease which requires expensive drug therapy for successful treatment. Most prevalent colony morphotypes are smooth opaque, smooth transparent and rough, with the last two being the faster growers in vivo.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012880:1711062:172366217236621724213552Dickeya dadantii Ech703, complete genometranscriptional regulator, TetR family7e-35147
NC_008596:3404832:343634934363493436951603Mycobacterium smegmatis str. MC2 155, complete genomeregulatory protein, TetR7e-1270.9
NC_017186:3947874:396178839617883962360573Amycolatopsis mediterranei S699 chromosome, complete genomeTetR family transcriptional regulator1e-1170.1
NC_014318:3947845:396175939617593962331573Amycolatopsis mediterranei U32 chromosome, complete genomeTetR family transcriptional regulator1e-1170.1
UCMB5137:2054735:209490420949042095476573Bacillus atrophaeus UCMB-5137transcriptional regulator1e-1066.6
NC_017186:2252438:225417822541782254768591Amycolatopsis mediterranei S699 chromosome, complete genomeTetR family transcriptional regulator2e-1065.9
NC_014318:2252417:225415722541572254747591Amycolatopsis mediterranei U32 chromosome, complete genomeTetR family transcriptional regulator2e-1065.9
NC_012108:904260:918404918404919174771Desulfobacterium autotrophicum HRM2, complete genometranscriptional regulator (TetR family protein)3e-1065.5
NC_008596:3404832:343369134336913434278588Mycobacterium smegmatis str. MC2 155, complete genometranscriptional regulator, putative7e-1064.3
NC_009663:946285:965227965227965805579Sulfurovum sp. NBC37-1, complete genomeTetR family transcriptional regulator2e-0962.4
NC_008505:36638:424534245343028576Lactococcus lactis subsp. cremoris SK11 plasmid 3, completeTranscriptional regulator5e-0961.2
NC_007493:1:138391383914498660Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequenceregulatory protein TetR family1e-0859.7
NC_009049:80184:951149511495773660Rhodobacter sphaeroides ATCC 17029 chromosome 1, complete sequencetranscriptional regulator, TetR family2e-0859.3
NC_016935:2503071:254529025452902545868579Paenibacillus mucilaginosus 3016 chromosome, complete genomeTetR family transcriptional regulator2e-0858.9
NC_015690:1967244:201240220124022012980579Paenibacillus mucilaginosus KNP414 chromosome, complete genomeTetR family transcriptional regulator2e-0858.9
NC_009663:946285:955392955392955952561Sulfurovum sp. NBC37-1, complete genomeTetR family transcriptional regulator3e-0858.5
NC_012791:2233098:224178422417842242434651Variovorax paradoxus S110 chromosome 1, complete genometranscriptional regulator, TetR family5e-0858.2
NC_009850:1131492:114750511475051148098594Arcobacter butzleri RM4018, complete genometranscriptional regulator, TetR family6e-0857.8
NC_002939:805794:826391826391826981591Geobacter sulfurreducens PCA, complete genometranscriptional regulator, TetR family8e-0857.4
NC_008321:3189974:321189232118923212503612Shewanella sp. MR-4, complete genometranscriptional regulator, TetR family2e-0755.8
NC_013422:1732677:174532717453271745968642Halothiobacillus neapolitanus c2, complete genometranscriptional regulator, TetR family3e-0755.5
NC_006512:728281:746456746456747082627Idiomarina loihiensis L2TR, complete genomeTranscriptional regulator, TetR family3e-0755.1
NC_014659:2737843:273784327378432738469627Rhodococcus equi 103S, complete genomeTetR family transcriptional regulator4e-0755.1
NC_014666:3311893:331668033166803317264585Frankia sp. EuI1c chromosome, complete genomeregulatory protein TetR6e-0754.3
NC_009439:1075170:109619310961931096795603Pseudomonas mendocina ymp, complete genomeTetR family transcriptional regulator9e-0753.9
NC_010814:155834:160065160065160667603Geobacter lovleyi SZ, complete genometranscriptional regulator, TetR family1e-0653.5
NC_021150:1823874:182683718268371827376540Azotobacter vinelandii CA6, complete genometranscriptional regulator, TetR family1e-0653.1
NC_012560:1823861:182682418268241827363540Azotobacter vinelandii DJ, complete genometranscriptional regulator, TetR family1e-0653.1
NC_006138:2630338:265032026503202650934615Desulfotalea psychrophila LSv54, complete genomehypothetical protein1e-0653.1
NC_009925:2240871:225482422548242255411588Acaryochloris marina MBIC11017, complete genometranscriptional regulator, TetR family2e-0652.8
NC_015957:7348269:737280273728027373383582Streptomyces violaceusniger Tu 4113 chromosome, complete genomeregulatory protein TetR3e-0652
NC_015410:1144272:116402411640241164626603Pseudomonas mendocina NK-01 chromosome, complete genomeTetR family transcriptional regulator4e-0651.6
NC_015690:1348691:137475713747571375335579Paenibacillus mucilaginosus KNP414 chromosome, complete genomeTetR family transcriptional regulator9e-0650.4
NC_013385:1882549:191438119143811914974594Ammonifex degensii KC4, complete genometranscriptional regulator, TetR family9e-0650.4