Pre_GI: BLASTP Hits

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Query: NC_001264:28266:58122 Deinococcus radiodurans R1 chromosome 2, complete sequence

Start: 58122, End: 59516, Length: 1395

Host Lineage: Deinococcus radiodurans; Deinococcus; Deinococcaceae; Deinococcales; Deinococcus-Thermus; Bacteria

General Information: This red-pigmented organism's name means "strange berry that withstands radiation", marking the fact that this organism is one of the most radiation-resistant known. It can tolerate radiation levels at 1000 times the levels that would kill a human and it was originally isolated in 1956 from a can of meat that had been irradiated with X-rays. The resistance to radiation may reflect its resistance to dessication, which also causes DNA damage. This organism may be of use in cleaning up toxic metals found at nuclear weapons production sites due to the radiation resistance. This bacterium is also a highly efficient transformer, and can readily take up exogenous DNA from the environment, which may also aid DNA repair. This organism carries multiple copies of many DNA repair genes, suggesting a robust system for dealing with DNA damage. The recombination system may rely on multiple copies of various repeat elements found throughout the genome.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013939:1927424:1941123194112319424631341Deferribacter desulfuricans SSM1, complete genome3-oxoacid CoA-transferase1e-103377
NC_011894:2359128:237904023790402379666627Methylobacterium nodulans ORS 2060, complete genome3-oxoacid CoA-transferase, B subunit2e-57223
NC_003454:339345:345583345583346236654Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeButyrate-acetoacetate CoA-transferase subunit B4e-57222
NC_020210:2044944:206240720624072063075669Geobacillus sp. GHH01, complete genomesuccinyl CoA:3-oxoacid CoA-transferase subunit B4e-56219
NC_012779:2127542:212689521268952127545651Edwardsiella ictaluri 93-146, complete genomeacetate CoA-transferase subunit beta1e-55218
NC_010338:4148667:416498441649844165631648Caulobacter sp. K31, complete genome3-oxoacid CoA-transferase, B subunit5e-53209
NC_021171:1689518:170285417028541703504651Bacillus sp. 1NLA3E, complete genomeScoB protein8e-53208
NC_009718:203998:214867214867215517651Fervidobacterium nodosum Rt17-B1, complete genome3-oxoacid CoA-transferase, B subunit2e-52207
NC_009454:259022:279910279910280572663Pelotomaculum thermopropionicum SI, complete genomeacyl CoA:acetate/3-ketoacid CoA transferase, beta subunit4e-52206
NC_015711:6522808:655595065559506556606657Myxococcus fulvus HW-1 chromosome, complete genome3-oxoacid CoA-transferase subunit B9e-52204
NC_016751:469289:475170475170475820651Marinitoga piezophila KA3 chromosome, complete genome3-oxoacid CoA-transferase subunit B2e-51203
NC_014614:1259236:127595912759591276606648Clostridium sticklandii, complete genomeacetyl-CoA:acetoacetyl-CoA transferase, beta subunit7e-51201
NC_004193:2692136:270086827008682701530663Oceanobacillus iheyensis HTE831, complete genomebutyate-acetoacetate CA-transferase large chain2e-50200
NC_006834:787500:814923814923815552630Xanthomonas oryzae pv. oryzae KACC10331, complete genomeIpsJ protein5e-50199
NC_014958:557208:581357581357581986630Deinococcus maricopensis DSM 21211 chromosome, complete genome3-oxoacid CoA-transferase subunit B9e-50198
NC_015673:525638:545198545198545836639Corynebacterium resistens DSM 45100 chromosome, complete genome3-oxoacid CoA-transferase subunit B6e-50198
NC_010170:4409683:442517644251764425814639Bordetella petrii, complete genome3-oxoacid CoA-transferase subunit B1e-49197
NC_015514:3351052:335536733553673356041675Cellulomonas fimi ATCC 484 chromosome, complete genome3-oxoacid CoA-transferase subunit B2e-49197
NC_016510:1958453:196398119639811964637657Flavobacterium columnare ATCC 49512 chromosome, complete genome3-oxoacid CoA-transferase subunit B family protein AtoA2e-49196
NC_017192:88940:101833101833102465633Arcobacter sp. L, complete genomeputative 3-oxoacid CoA-transferase beta subunit3e-49196
NC_012785:638000:644587644587645246660Kosmotoga olearia TBF 19.5.1, complete genome3-oxoacid CoA-transferase, B subunit4e-49196
NC_010003:1126800:115088611508861151536651Petrotoga mobilis SJ95, complete genome3-oxoacid CoA-transferase, B subunit6e-49195
NC_020291:2487575:249613724961372496796660Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomebutyrate--acetoacetate CoA-transferase subunit B3e-48193
NC_011283:2323687:234602723460272346683657Klebsiella pneumoniae 342 chromosome, complete genome3-oxoacid CoA-transferase subunit B3e-48192
NC_009454:259022:279244279244279894651Pelotomaculum thermopropionicum SI, complete genomeacyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit4e-48192
NC_008593:1917118:195374619537461954399654Clostridium novyi NT, complete genomeButyrate-acetoacetate CoA-transferase subunit B1e-47191
NC_007953:572926:592790592790593425636Burkholderia xenovorans LB400 chromosome 3, complete sequence3-oxoacid CoA-transferase, subunit B2e-47190
NC_008345:3287000:328773132877313288387657Shewanella frigidimarina NCIMB 400, complete genome3-oxoacid CoA-transferase, B subunit3e-47189
NC_008700:1627401:164519216451921645848657Shewanella amazonensis SB2B, complete genome3-oxoacid CoA-transferase4e-47189
NC_015737:879545:879545879545880201657Clostridium sp. SY8519, complete genomehypothetical protein5e-47189
NC_015425:2144639:217876321787632179416654Clostridium botulinum BKT015925 chromosome, complete genome3-oxoacid CoA-transferase subunit B9e-46184
NC_011881:89705:110604110604111275672Arthrobacter chlorophenolicus A6 plasmid pACHL02, complete3-oxoacid CoA-transferase, B subunit2e-45183
NC_015711:6522808:655661865566186557316699Myxococcus fulvus HW-1 chromosome, complete genome3-oxoacid CoA-transferase subunit A3e-45183
NC_010170:1219641:123181512318151232453639Bordetella petrii, complete genome3-oxoacid CoA-transferase subunit B2e-44180
NC_010338:4148667:416427441642744164984711Caulobacter sp. K31, complete genome3-oxoacid CoA-transferase, A subunit1e-42174
NC_012470:580373:603113603113603757645Streptococcus equi subsp. zooepidemicus, complete genomeacetate CoA-transferase beta subunit3e-42173
NC_020210:2044944:206309620630962063782687Geobacillus sp. GHH01, complete genomesuccinyl CoA:3-oxoacid CoA-transferase subunit A4e-42172
NC_010617:665830:669995669995670669675Kocuria rhizophila DC2201, complete genome3-oxoadipate CoA-transferase subunit B5e-41169
NC_006834:787500:814159814159814923765Xanthomonas oryzae pv. oryzae KACC10331, complete genomeIpsJ protein7e-41168
NC_020911:3076791:309762530976253098311687Octadecabacter antarcticus 307, complete genomefamily I CoA-transferase subunit B4e-40166
NC_009512:5920960:593841259384125939053642Pseudomonas putida F1, complete genome3-oxoacid CoA-transferase, B subunit1e-39164
NC_014931:5573942:559059355905935591240648Variovorax paradoxus EPS chromosome, complete genome3-oxoacid CoA-transferase, B subunit3e-39163
NC_016604:3184855:322667732266773227360684Mycobacterium rhodesiae NBB3 chromosome, complete genome3-oxoacid CoA-transferase subunit B7e-39161
NC_014958:557208:581986581986582681696Deinococcus maricopensis DSM 21211 chromosome, complete genome3-oxoacid CoA-transferase subunit A2e-38160
NC_017986:4790482:484228948422894842930642Pseudomonas putida ND6 chromosome, complete genome3-oxoadipate CoA-transferase, subunit B4e-38159
NC_010552:58294:582945829458950657Burkholderia ambifaria MC40-6 chromosome 2, complete sequence3-oxoacid CoA-transferase, B subunit3e-38159
NC_008061:2368517:239532523953252395981657Burkholderia cenocepacia AU 1054 chromosome 2, complete sequence3-oxoacid CoA-transferase, subunit B3e-38159
NC_007511:3512100:353156535315653532221657Burkholderia sp. 383 chromosome 2, complete sequence3-oxoadipate CoA-transferase3e-38159
NC_011001:63986:639866398664642657Burkholderia cenocepacia J2315 chromosome 2, complete sequence3-oxoadipate CoA-transferase subunit B3e-38159
NC_017986:5833819:585352458535245854246723Pseudomonas putida ND6 chromosome, complete genome4-methyl-3-oxoadipate CoA-transferase beta-subunit1e-37157
NC_008705:1839983:185991018599101860632723Mycobacterium sp. KMS, complete genome3-oxoacid CoA-transferase, B subunit2e-37157
NC_009077:1725683:177916317791631779885723Mycobacterium sp. JLS, complete genome3-oxoacid CoA-transferase, B subunit2e-37157
NC_008705:1839983:184649518464951847217723Mycobacterium sp. KMS, complete genome3-oxoacid CoA-transferase, B subunit2e-37157
NC_010170:1219641:123109812310981231802705Bordetella petrii, complete genome3-oxoacid CoA-transferase subunit A7e-37155
NC_008061:2368517:239600223960022396718717Burkholderia cenocepacia AU 1054 chromosome 2, complete sequence3-oxoacid CoA-transferase, subunit A1e-36154
NC_007511:3512100:353224135322413532954714Burkholderia sp. 383 chromosome 2, complete sequence3-oxoadipate CoA-transferase2e-36153
NC_015160:3749636:376486137648613765508648Odoribacter splanchnicus DSM 20712 chromosome, complete genome3-oxoacid CoA-transferase, A subunit2e-36153
NC_008345:3287000:328701332870133287717705Shewanella frigidimarina NCIMB 400, complete genome3-oxoacid CoA-transferase, A subunit2e-36153
NC_007953:572926:592082592082592789708Burkholderia xenovorans LB400 chromosome 3, complete sequence3-oxoacid CoA-transferase, subunit A3e-36153
NC_016604:3184855:322598532259853226680696Mycobacterium rhodesiae NBB3 chromosome, complete genome3-oxoacid CoA-transferase subunit A7e-36152
NC_008700:1627401:164585916458591646560702Shewanella amazonensis SB2B, complete genome3-oxoacid CoA-transferase4e-36152
NC_021171:1689518:170194617019461702647702Bacillus sp. 1NLA3E, complete genomeScoA protein9e-36151
NC_014640:4951076:497677449767744977472699Achromobacter xylosoxidans A8 chromosome, complete genome3-oxoadipate CoA-transferase subunit A2e-35150
NC_014640:4951076:497611549761154976777663Achromobacter xylosoxidans A8 chromosome, complete genome3-oxoadipate CoA-transferase subunit B6e-35149
NC_016510:1958453:196506119650611965759699Flavobacterium columnare ATCC 49512 chromosome, complete genome3-oxoacid CoA-transferase subunit A1e-34148
NC_015673:525638:544425544425545120696Corynebacterium resistens DSM 45100 chromosome, complete genome3-oxoacid CoA-transferase subunit A4e-34146
NC_003454:339345:346254346254346907654Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeAcetoacetate:butyrate/acetate coenzyme A transferase4e-34146
NC_010617:665830:669300669300669998699Kocuria rhizophila DC2201, complete genome3-oxoadipate CoA-transferase subunit A6e-34145
NC_011881:89705:109916109916110602687Arthrobacter chlorophenolicus A6 plasmid pACHL02, complete3-oxoacid CoA-transferase, A subunit6e-34145
NC_012470:580373:602457602457603107651Streptococcus equi subsp. zooepidemicus, complete genomeacetate CoA-transferase alpha subunit1e-33144
NC_015514:3351052:335602533560253356804780Cellulomonas fimi ATCC 484 chromosome, complete genome3-oxoacid CoA-transferase subunit A1e-33144
NC_009338:555587:554892554892555590699Mycobacterium gilvum PYR-GCK chromosome, complete genome3-oxoacid CoA-transferase subunit A2e-32140
NC_012785:638000:645243645243645896654Kosmotoga olearia TBF 19.5.1, complete genome3-oxoacid CoA-transferase, A subunit6e-32139
NC_015425:2144639:217943621794362180152717Clostridium botulinum BKT015925 chromosome, complete genomeacetate CoA-transferase subunit alpha4e-32139
NC_009512:5920960:593770859377085938403696Pseudomonas putida F1, complete genome3-oxoacid CoA-transferase, A subunit4e-32139
NC_008705:1839983:185921518592151859913699Mycobacterium sp. KMS, complete genome3-oxoacid CoA-transferase, A subunit4e-32139
NC_009077:1725683:177846817784681779166699Mycobacterium sp. JLS, complete genome3-oxoacid CoA-transferase, A subunit4e-32139
NC_008705:1839983:184580018458001846498699Mycobacterium sp. KMS, complete genome3-oxoacid CoA-transferase, A subunit4e-32139
NC_014931:5573942:559123755912375591938702Variovorax paradoxus EPS chromosome, complete genome3-oxoacid CoA-transferase, A subunit8e-32138
NC_011894:2359128:237837923783792379035657Methylobacterium nodulans ORS 2060, complete genome3-oxoacid CoA-transferase, A subunit2e-31137
NC_010718:2385400:238540023854002386056657Natranaerobius thermophilus JW/NM-WN-LF, complete genomebutyryl-CoA:acetoacetate CoA-transferase alpha subunit4e-31136
NC_016751:469289:474517474517475170654Marinitoga piezophila KA3 chromosome, complete genome3-oxoacid CoA-transferase subunit A6e-31135
NC_020291:2487575:249548424954842496137654Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeacetate CoA-transferase subunit alpha5e-30132
NC_020911:3076791:309830830983083099027720Octadecabacter antarcticus 307, complete genomefamily I CoA-transferase subunit A1e-28127
NC_017986:5833819:585424358542435854932690Pseudomonas putida ND6 chromosome, complete genome4-methyl-3-oxoadipate CoA-transferase alpha-subunit1e-27124
NC_009718:203998:215519215519216172654Fervidobacterium nodosum Rt17-B1, complete genome3-oxoacid CoA-transferase, A subunit2e-27124
NC_008593:1917118:195441319544131955129717Clostridium novyi NT, complete genomeAcetate CoA-transferase alpha subunit4e-27123
NC_017192:88940:101184101184101831648Arcobacter sp. L, complete genomeputative 3-oxoacid CoA-transferase alpha subunit1e-26121
NC_014614:1259236:127530512753051275955651Clostridium sticklandii, complete genomeacetyl-CoA:acetoacetyl-CoA transferase, alpha subunit2e-26120
NC_004193:2692136:270154927015492702196648Oceanobacillus iheyensis HTE831, complete genomebutyrate-acetoacetate CoA-transferase small chain1e-25117
NC_010003:1126800:115023311502331150889657Petrotoga mobilis SJ95, complete genome3-oxoacid CoA-transferase, A subunit8e-25115
NC_011894:2747491:2756359275635927582991941Methylobacterium nodulans ORS 2060, complete genomecoenzyme A transferase5e-22105
NC_010170:1470755:148115114811511481471321Bordetella petrii, complete genome3-oxoacid CoA-transferase subunit B, fragment1e-21105
NC_015737:2691246:2738530273853027401131584Clostridium sp. SY8519, complete genomehypothetical protein9e-21102
NC_011660:366000:3854333854333870161584Listeria monocytogenes HCC23 chromosome, complete genomepropionate CoA-transferase6e-2099
NC_003212:2293425:2293425229342522950081584Listeria innocua Clip11262, complete genomehypothetical protein1e-1997.8
NC_009454:1577319:1611070161107016126321563Pelotomaculum thermopropionicum SI, complete genomeacyl CoA:acetate/3-ketoacid CoA transferase2e-1997.4
NC_007336:601190:6199676199676215351569Ralstonia eutropha JMP134 megaplasmid, complete sequenceCoenzyme A transferase2e-1894.4
NC_015873:1241354:1260304126030412618541551Megasphaera elsdenii DSM 20460, complete genomecoenzyme A transferase2e-1790.9
NC_003366:128783:1320701320701336201551Clostridium perfringens str. 13, complete genomepropionate CoA-transferase5e-1789.4
NC_009454:489954:5028455028455043981554Pelotomaculum thermopropionicum SI, complete genomeacyl CoA:acetate/3-ketoacid CoA transferase6e-1789.4
NC_007644:1293701:1301959130195913035421584Moorella thermoacetica ATCC 39073, complete genomeCoenzyme A transferase3e-1686.7
NC_020291:2291418:2296114229611422976581545Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeacyl CoA:acetate/3-ketoacid CoA transferase3e-1686.7
NC_007347:1596040:1612668161266816146772010Ralstonia eutropha JMP134 chromosome 1, complete sequenceCoenzyme A transferase6e-1685.9
NC_019962:1750497:1865701186570118672691569Natrinema pellirubrum DSM 15624, complete genomeacyl CoA:acetate/3-ketoacid CoA transferase1e-1584.7
NC_010511:871905:8946088946088966112004Methylobacterium sp. 4-46 chromosome, complete genomecoenzyme A transferase1e-1481.3
NC_019908:2496149:2509209250920925108101602Brachyspira pilosicoli P43/6/78 chromosome, complete genomebifunctional acetyl-CoA:acetoacetyl-CoA transferase subunit alpha/beta3e-1480.5
NC_014330:697429:7077997077997093971599Brachyspira pilosicoli 95/1000 chromosome, complete genomebifunctional acetyl-CoA:acetoacetyl-CoA transferase subunit alpha/beta3e-1480.5
NC_017243:3141500:3161896316189631634551560Brachyspira intermedia PWS/A chromosome, complete genomecoenzyme A transferase1e-1378.6
NC_012880:1585255:1590455159045515920501596Dickeya dadantii Ech703, complete genomecoenzyme A transferase2e-1377.8
NC_009617:2355662:2370773237077323723291557Clostridium beijerinckii NCIMB 8052 chromosome, complete genomecoenzyme A transferase1e-1274.7
NC_009376:769199:7862787862787879091632Pyrobaculum arsenaticum DSM 13514 chromosome, complete genomecoenzyme A transferase8e-1272
NC_002578:877609:8776098776098794051797Thermoplasma acidophilum DSM 1728, complete genomehypothetical protein3e-1170.1
NC_013929:7606749:760984076098407610688849Streptomyces scabiei 87.22 chromosome, complete genomeCoA-transferase1e-1068.2
NC_013757:3613438:3616616361661636185171902Geodermatophilus obscurus DSM 43160, complete genomecoenzyme A transferase1e-0965.1
NC_014220:1269870:127075212707521271624873Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeGlutaconate CoA-transferase3e-0963.9
NC_018750:1835500:185508218550821855939858Streptomyces venezuelae ATCC 10712, complete genomeputative CoA-transferase subunit alpha3e-0963.5
NC_008699:2916752:291675229167522917633882Nocardioides sp. JS614, complete genomecoenzyme A transferase1e-0861.6
NC_009454:1577319:1655509165550916568101302Pelotomaculum thermopropionicum SI, complete genomeacylCoA:acetate/3-ketoacidcoatransferase3e-0860.1
NC_014960:216965:233412233412234173762Anaerolinea thermophila UNI-1, complete genome3-oxoadipate CoA-transferase7e-0858.9