Pre_GI: BLASTP Hits

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Query: AP010958:3853082:3892405 Escherichia coli O103:H2 str. 12009 DNA, complete genome

Start: 3892405, End: 3893028, Length: 624

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013353:3853082:389240538924053893028624Escherichia coli O103:H2 str. 12009, complete genometranscriptional regulator2e-92338
NC_009436:3807420:382508438250843825629546Enterobacter sp. 638, complete genomePadR family transcriptional regulator1e-59229
NC_014623:9089998:909151390915139092082570Stigmatella aurantiaca DW4/3-1 chromosome, complete genomePadR family transcriptional regulator2e-22105
NC_017059:1727095:173115517311551731733579Rhodospirillum photometricum DSM 122, complete genomePadR family transcriptional regulator1e-1996.3
NC_009484:2442923:245189424518942452499606Acidiphilium cryptum JF-5 chromosome, complete genomePadR-like family transcriptional regulator1e-1893.2
NC_015186:2719645:272861527286152729205591Acidiphilium multivorum AIU301, complete genomePadR family transcriptional regulator2e-1892
NC_005810:4045303:405699140569914057671681Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein1e-1686.7
NC_009381:720000:728554728554729234681Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein1e-1686.7
NC_017168:144000:152561152561153241681Yersinia pestis A1122 chromosome, complete genomehypothetical protein1e-1686.7
NC_014118:1083492:109634410963441097183840Burkholderia sp. CCGE1002 chromosome chromosome 2, completetranscriptional regulator, PadR-like family2e-1478.6
NC_004369:2968251:299762429976242998268645Corynebacterium efficiens YS-314, complete genomehypothetical protein3e-1478.6
NC_009075:15017:207712077121475705Burkholderia pseudomallei 668 chromosome II, complete sequencetranscriptional regulator, PadR family1e-1376.3
NC_010515:1491590:150659215065921507305714Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencetranscriptional regulator, PadR-like family1e-1273.2
NC_010170:4196197:420326942032694203949681Bordetella petrii, complete genometranscriptional regulatro, PadR-like6e-1270.9
NC_004578:4708220:472304647230464723645600Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein2e-1168.9
NC_013642:942767:957647957647958099453Thermotoga naphthophila RKU-10, complete genometranscriptional regulator, PadR-like family9e-1063.5
NC_019791:1189908:120726812072681207747480Caldisphaera lagunensis DSM 15908 chromosome, complete genometranscriptional regulator2e-0962.4
NC_010483:642577:662384662384662836453Thermotoga sp. RQ2, complete genometranscriptional regulator, PadR-like family3e-0962
NC_015947:444466:447061447061447621561Burkholderia sp. JV3 chromosome, complete genomePadR-like family transcriptional regulator9e-0960.5
NC_017275:1909403:192994619299461930341396Sulfolobus islandicus HVE10/4 chromosome, complete genomePadR-like family transcriptional regulator1e-0860.1
NC_012589:2006323:202686520268652027260396Sulfolobus islandicus L.S.2.15, complete genometranscriptional regulator PadR family protein1e-0859.7
NC_012588:1874242:189478518947851895180396Sulfolobus islandicus M.14.25 chromosome, complete genomePadR family transcripitonal regulator1e-0859.7
NC_012632:1980332:200088120008812001276396Sulfolobus islandicus M.16.27 chromosome, complete genomePadR family transcriptional regulator1e-0859.7
NC_012726:1878503:189904618990461899441396Sulfolobus islandicus M.16.4 chromosome, complete genomePadR-like family transcriptional regulator1e-0859.7
NC_013769:1993557:201409920140992014494396Sulfolobus islandicus L.D.8.5 chromosome, complete genomePadR family transcriptional regulator1e-0859.7
NC_010943:493002:497118497118497678561Stenotrophomonas maltophilia K279a, complete genomeputative PadR-family transcriptional regulator2e-0859.3
NC_011071:429204:432610432610433170561Stenotrophomonas maltophilia R551-3, complete genometranscriptional regulator, PadR-like family3e-0858.5
NC_013729:6217500:622935962293596230051693Kribbella flavida DSM 17836, complete genometranscriptional regulator, PadR-like family2e-0755.8
NC_014210:3817948:382363438236343824467834Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,transcriptional regulator, PadR-like family3e-0755.1
NC_002689:1548000:157326215732621573729468Thermoplasma volcanium GSS1, complete genomePredicted transcription regulator6e-0754.3
NC_015474:72103:752397523975691453Pyrococcus sp. NA2 chromosome, complete genomeTranscription regulator, PadR-like family7e-0753.9