Pre_GI: OUP Neighbours

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Query: NC_006512:1942000 Idiomarina loihiensis L2TR, complete genome

D: 30.2347

Host Lineage: Idiomarina loihiensis; Idiomarina; Idiomarinaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This is the type strain for this organism, which was isolated from a hydrothermal vent at a depth of 1300 m from the Lo'ihi Seamount southeast of Hawaii. This organism grows optimally in salt concentrations of 7.5 to 10%. Genome comparison has suggested that the bacterium has maintained its amino acid transport and degradation systems but lost sugar transport and certain sugar metabolic genes suggesting that it lives on amino acids rather than sugars. This may be in keeping with the environment this organism grows in, which is at hydrothermal deep sea vents that are characterized by collections of proteinaceous particles. This organism may colonize these particles by producing exopolysaccharides.

Number of Neighbours: 4

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_006512:952894Idiomarina loihiensis L2TR, complete genome79.856 %Subject ←→ Query30.4232
NC_006512:2211654Idiomarina loihiensis L2TR, complete genome83.027 %Subject ←→ Query30.8349
NC_013730:3695674Spirosoma linguale DSM 74, complete genome75.2083 %Subject ←→ Query31.8022
NC_015572:1Methylomonas methanica MC09 chromosome, complete genome75.5178 %Subject ←→ Query34.0009