Pre_GI: OUP Neighbours

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Query: NC_010610:1178430 Lactobacillus fermentum IFO 3956, complete genome

D: 41.4499

Host Lineage: Lactobacillus fermentum; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. This probiotic species has been associated with active caries lesions.

Number of Neighbours: 11




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_013730:2490000*Spirosoma linguale DSM 74, complete genome75.2328 %Subject Query30.4444
NC_015428:2291430*Lactobacillus buchneri NRRL B-30929 chromosome, complete genome76.3174 %Subject Query30.5599
NC_007576:1854136*Lactobacillus sakei subsp. sakei 23K, complete genome75.9222 %Subject Query31.3415
NC_014727:95875*Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,75.1103 %Subject ←→ Query35.9584
NC_015428:823420*Lactobacillus buchneri NRRL B-30929 chromosome, complete genome75.5331 %Subject ←→ Query37.54
NC_015428:700479*Lactobacillus buchneri NRRL B-30929 chromosome, complete genome76.2132 %Subject ←→ Query38.8838
NC_010610:1765000Lactobacillus fermentum IFO 3956, complete genome81.1642 %Subject ←→ Query39.8309
NC_010610:269380*Lactobacillus fermentum IFO 3956, complete genome77.0404 %Subject ←→ Query40.6154
NC_010610:107500Lactobacillus fermentum IFO 3956, complete genome79.1728 %Subject ←→ Query41.4381
NC_010610:908452Lactobacillus fermentum IFO 3956, complete genome81.8903 %Subject ←→ Query43.1435
NC_010610:1385066*Lactobacillus fermentum IFO 3956, complete genome82.2702 %Subject ←→ Query43.1625