Pre_GI: OUP Neighbours

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Query: NC_010513:542312 Xylella fastidiosa M12 chromosome, complete genome

D: 42.0784

Host Lineage: Xylella fastidiosa; Xylella; Xanthomonadaceae; Xanthomonadales; Proteobacteria; Bacteria

General Information: Causal agent of citrus variegated chlorosis. This organism was first identified in 1993 as the causal agent of citrus variegated chlorosis, a disease that affects varieties of sweet oranges. This disease was first noticed in Brazil in 1987, and it greatly affects commercial orchards resulting in crop devastation worldwide. Other strains of this species cause a range of diseases in mulberry, pear, almond, elm, sycamore, oak, maple, pecan and coffee which collectively result in multimillion dollar devastation of economically important plants. The bacteria are transmitted from the gut of the insect vector (sharpshooter leafhopper) to the plant xylem (water conducting system) when the insect feeds. Xylella fastidiosa is similar to Xanthomonas campestris pv. campestris in that it produces a wide variety of pathogenic factors for colonization in a host-specific manner including a large number of fimbrial and afimbrial adhesins for attachment. It does not contain a type III secretion system, but possesses genes for a type II secretion system for export of exoenzymes that degrade the plant cell wall and allow the bacterium to colonize the plant xylem. The cell produces an exopolysaccharide that is similar to the xanthan gum produced by Xanthomonas campestris pv. campestris.

Number of Neighbours: 40




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_019907:287339*Liberibacter crescens BT-1 chromosome, complete genome79.5864 %Subject Query23.1609
NC_005956:1139342*Bartonella henselae str. Houston-1, complete genome80.2665 %Subject Query23.553
NC_019907:920797*Liberibacter crescens BT-1 chromosome, complete genome80.5607 %Subject Query23.7676
NC_019907:467377*Liberibacter crescens BT-1 chromosome, complete genome79.2188 %Subject Query24.2863
NC_020301:1132927Bartonella vinsonii subsp. berkhoffii str. Winnie, complete genome78.7714 %Subject Query24.7957
NC_020301:669000*Bartonella vinsonii subsp. berkhoffii str. Winnie, complete genome76.0355 %Subject Query25.5862
NC_020301:1084993*Bartonella vinsonii subsp. berkhoffii str. Winnie, complete genome81.9455 %Subject Query26.2524
NC_020300:131782*Bartonella australis Aust/NH1, complete genome76.1642 %Subject Query28.0004
NC_020300:675551*Bartonella australis Aust/NH1, complete genome75.6189 %Subject Query28.5931
NC_013721:1581370*Gardnerella vaginalis 409-05, complete genome77.6562 %Subject Query29.3242
NC_020300:646500*Bartonella australis Aust/NH1, complete genome76.008 %Subject Query29.3818
NC_015276:2804874*Marinomonas mediterranea MMB-1 chromosome, complete genome80.5913 %Subject Query29.8547
NC_010161:1598000*Bartonella tribocorum CIP 105476, complete genome80.2206 %Subject Query30.262
NC_013009:225722*Neorickettsia risticii str. Illinois, complete genome76.9455 %Subject Query30.3647
NC_014644:1532500*Gardnerella vaginalis ATCC 14019 chromosome, complete genome81.8229 %Subject Query30.4718
NC_005956:1648000*Bartonella henselae str. Houston-1, complete genome75.3983 %Subject Query31.2454
NC_006138:1245944*Desulfotalea psychrophila LSv54, complete genome75.7445 %Subject ←→ Query32.3163
NC_015276:2171355*Marinomonas mediterranea MMB-1 chromosome, complete genome80.3248 %Subject ←→ Query32.7927
NC_015581:128350*Thioalkalimicrobium cyclicum ALM1 chromosome, complete genome75.0551 %Subject ←→ Query34.2108
NC_007645:2779381*Hahella chejuensis KCTC 2396, complete genome75.4075 %Subject ←→ Query45.1313