Pre_GI Gene

Some Help

Host: NC_016842 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_016842:546661 Treponema pallidum subsp. pertenue str. SamoaD chromosome, complete

Host Lineage: Treponema pallidum; Treponema; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: This strain was isolated in Western Samoa in 1953. Treponema pallidum subsp. pertenue causes the chronic and disfiguring illness called yaws. The disease starts as a skin infection causing persistent ulcers and progresses to form tumor-like masses. This disease tends to infect children and is common in rural areas in Africa, Southeast Asia and equatorial South America.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
5466615484781818GTP-binding protein LepAQuickGO ontologyBLASTP
548416549147732CarD family transcriptional regulatorQuickGO ontologyBLASTP
5491445503911248bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase2-C-methyl-D-erythritol 24-cyclodiphosphate synthaseQuickGO ontologyBLASTP
5504655518651401Trk family potassium K transporter membrane proteinQuickGO ontologyBLASTP
5519795548612883excision endonuclease subunit UvrAQuickGO ontologyBLASTP
5548585578332976hypothetical proteinBLASTP
5578475594271581integral membrane protein MviNQuickGO ontologyBLASTP
559424560014591crossover junction endoribonuclease subunit CQuickGO ontologyBLASTP
559996560688693thiamine pyrophosphokinaseQuickGO ontologyBLASTP
5606855620611377sigma-54 dependent response regulatorQuickGO ontologyBLASTP
5632575645281272DNA-directed DNA polymerase III gamma and tau subunitsQuickGO ontologyBLASTP
564539565018480hypothetical proteinBLASTP
5650155661691155undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferaseQuickGO ontologyBLASTP
5661735688182646S16 family endopeptidase LaQuickGO ontologyBLASTP
568954569517564elongation factor PQuickGO ontologyBLASTP
569514569666153hypothetical proteinBLASTP
5696655716712007ATP-dependent helicase HrpAQuickGO ontologyBLASTP
571719572348630two-sector ATPase V1 subunit DQuickGO ontologyBLASTP
5724435738851443two-sector ATPase V1 subunit BQuickGO ontologyBLASTP
5738825756991818two-sector ATPase V1 subunit AQuickGO ontologyBLASTP
575696576322627hypothetical proteinBLASTP