Pre_GI Gene

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Host: NC_013929 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013929:6251989 Streptomyces scabiei 87.22 chromosome, complete genome

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
62510726251992921oxidoreductaseQuickGO ontologyBLASTP
625198962538631875iron-suplhur oxidoreductaseQuickGO ontologyBLASTP
625386062561752316oxidoreductaseQuickGO ontologyBLASTP
62563296256946618hypothetical protein
62572346257392159hypothetical protein
62575016258466966hypothetical protein
62584936259029537hypothetical protein
62593446259805462DNA-binding proteinQuickGO ontologyBLASTP
62598086260386579hydrolaseQuickGO ontologyBLASTP
62603746260784411NUDIX hydrolaseQuickGO ontologyBLASTP
62608446261614771hypothetical proteinBLASTP
62623306262599270hypothetical proteinBLASTP
62625966263048453mobile element trasfer proteinQuickGO ontologyBLASTP
62630456263248204hypothetical protein
62632456263571327hypothetical proteinBLASTP
62635686264431864mobile element transfer proteinQuickGO ontologyBLASTP
62644286265252825hypothetical proteinBLASTP
62652966265613318hypothetical proteinBLASTP
626572562678272103plasmid proteinQuickGO ontologyBLASTP
62680356268346312hypothetical proteinBLASTP
62684346269279846hypothetical proteinBLASTP
626927662707541479ATPGTP-binding proteinQuickGO ontologyBLASTP
62712416271480240Xis-like proteinQuickGO ontologyBLASTP
627148962727271239integraseQuickGO ontologyBLASTP