Pre_GI: BLASTP Hits

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Query: NC_013929:6251989:6259344 Streptomyces scabiei 87.22 chromosome, complete genome

Start: 6259344, End: 6259805, Length: 462

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_018750:2696000:270441127044112704896486Streptomyces venezuelae ATCC 10712, complete genomeTranscriptional regulator, GntR family1e-49194
NC_015656:4367764:436776443677644368216453Frankia symbiont of Datisca glomerata chromosome, complete genomeGntR family transcriptional regulator1e-30132
NC_013595:9547254:956468295646829565155474Streptosporangium roseum DSM 43021, complete genomeputative transcriptional regulator, GntR family3e-1580.5
NC_009953:1364500:137456313745631375276714Salinispora arenicola CNS-205 chromosome, complete genomeGntR family transcriptional regulator3e-0960.8
NC_015957:1070500:107590210759021076678777Streptomyces violaceusniger Tu 4113 chromosome, complete genomeGntR family transcriptional regulator1e-0652.4
NC_007963:2777066:277978327797832780505723Chromohalobacter salexigens DSM 3043, complete genomeGntR-like protein1e-0652.4
NC_006510:2044347:206127920612792062007729Geobacillus kaustophilus HTA426, complete genometranscriptional regulator1e-0652
NC_003155:4592000:462092046209204621708789Streptomyces avermitilis MA-4680, complete genomeregulatory protein KorSA, GntR-family transcriptional regulator2e-0651.6
NC_013510:5115500:512327551232755124111837Thermomonospora curvata DSM 43183, complete genometranscriptional regulator, GntR family2e-0651.6
NC_016582:5393568:540514154051415405914774Streptomyces bingchenggensis BCW-1 chromosome, complete genomeGntR family transcriptional regulator2e-0651.2
NC_016582:9551123:956203095620309562755726Streptomyces bingchenggensis BCW-1 chromosome, complete genomeGntR family transcriptional regulator3e-0650.8
NC_015733:3736104:378283237828323783611780Pseudomonas putida S16 chromosome, complete genomeDNA-binding transcriptional regulator GlcC3e-0650.8
NC_008148:583030:583030583030583788759Rubrobacter xylanophilus DSM 9941, complete genomeGntR-like protein3e-0650.8
NC_015968:3053565:306949830694983070244747Enterobacter asburiae LF7a chromosome, complete genomeGntR family transcriptional regulator with UTRA sensor domain3e-0650.4
NC_013929:5248000:526121052612105261998789Streptomyces scabiei 87.22 chromosome, complete genometranscriptional regulator5e-0650.1
NC_016947:666627:675648675648676442795Mycobacterium intracellulare MOTT-02 chromosome, complete genomeregulatory protein7e-0649.7
NC_014377:321949:321949321949322656708Thermosediminibacter oceani DSM 16646 chromosome, complete genometranscriptional regulator, GntR family7e-0649.7
NC_008578:591357:603976603976604737762Acidothermus cellulolyticus 11B, complete genometranscriptional regulator, GntR family7e-0649.7
NC_003155:4906639:491297149129714913759789Streptomyces avermitilis MA-4680, complete genomeregulatory protein KorSA, GntR-family transcriptional regulator6e-0649.7
NC_014246:676570:690222690222690977756Mobiluncus curtisii ATCC 43063 chromosome, complete genomeGntR family transcriptional regulator6e-0649.7
NC_013595:151500:158906158906159691786Streptosporangium roseum DSM 43021, complete genomeputative transcriptional regulator, GntR family6e-0649.7
NC_009800:1632585:164256316425631643282720Escherichia coli HS, complete genometranscriptional regulator, GntR family9e-0649.3
NC_008563:1651270:166368316636831664381699Escherichia coli APEC O1, complete genomeputative transcriptional regulator8e-0649.3
CP002185:1727493:173843117384311739129699Escherichia coli W, complete genomeputative transcriptional regulator8e-0649.3
CP002516:2361628:236672623667262367424699Escherichia coli KO11, complete genometranscriptional regulator, GntR family8e-0649.3
CU928160:1625535:163647316364731637171699Escherichia coli IAI1 chromosome, complete genomeputative DNA-binding transcriptional regulator HTH family8e-0649.3
NC_011415:1715644:172658217265821727280699Escherichia coli SE11 chromosome, complete genomeputative transcriptional regulator8e-0649.3
NC_011741:1625535:163647316364731637171699Escherichia coli IAI1 chromosome, complete genomeputative DNA-binding transcriptional regulator HTH family8e-0649.3
NC_016902:2361628:236672623667262367424699Escherichia coli KO11FL chromosome, complete genomeGntR family transcriptional regulator8e-0649.3
NC_014121:3483976:348848334884833489229747Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein8e-0649.3
NC_010498:1615980:162269216226921623390699Escherichia coli SMS-3-5, complete genomeGntR family transcriptional regulator9e-0649.3