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Query: NC_013929:6251989 Streptomyces scabiei 87.22 chromosome, complete genome

Start: 6251989, End: 6273099, Length: 21111

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015957:10403997*104039971042720123205Streptomyces violaceusniger Tu 4113 chromosome, complete genome01826BLASTN svgBLASTP svg
NC_003155:45920004592000463614444145Streptomyces avermitilis MA-4680, complete genome01503BLASTN svgBLASTP svg
NC_010572:41814034181403420609924697Streptomyces griseus subsp. griseus NBRC 13350, complete genome01493BLASTN svgBLASTP svg
NC_018750:21189072118907214335524449Streptomyces venezuelae ATCC 10712, complete genome01316BLASTN svgBLASTP svg
NC_015953:2681331*2681331270540224072Streptomyces sp. SirexAA-E chromosome, complete genome0948BLASTN svgBLASTP svg
NC_018750:2696000*2696000271359917600Streptomyces venezuelae ATCC 10712, complete genome2e-127464BLASTN svgBLASTP svg
NC_003888:5042283*5042283508756145279Streptomyces coelicolor A3(2), complete genome2e-84321BLASTN svgBLASTP svg
NC_015656:50847675084767510643621670Frankia symbiont of Datisca glomerata chromosome, complete genome6e-81309BLASTN svgBLASTP svg
NC_014318:6817860*6817860684509927240Amycolatopsis mediterranei U32 chromosome, complete genome7e-47196BLASTN svgBLASTP svg
NC_021177:4221309*4221309424940828100Streptomyces fulvissimus DSM 40593, complete genome9e-40172BLASTN svgBLASTP svg
NC_010572:3363830*3363830342121457385Streptomyces griseus subsp. griseus NBRC 13350, complete genome9e-37163BLASTN svgBLASTP svg
NC_015656:43677644367764439222424461Frankia symbiont of Datisca glomerata chromosome, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_009921:66910896691089673309942011Frankia sp. EAN1pec, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_003155:5163382*5163382518745824077Streptomyces avermitilis MA-4680, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_003888:5790104*5790104582064330540Streptomyces coelicolor A3(2), complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013510:54994475499447554883349387Thermomonospora curvata DSM 43183, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_009142:515828*51582853593820111Saccharopolyspora erythraea NRRL 2338, complete genome1e-0560BLASTN svgBLASTP svg