Pre_GI Gene

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Host: NC_012660 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012660:2045398 Pseudomonas fluorescens SBW25 chromosome, complete genome

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
204539820472661869putative transporter-like acyltransferase proteinQuickGO ontologyBLASTP
20473772047691315quaternary ammonium compound-resistance proteinQuickGO ontologyBLASTP
20477982048763966putative transporter-like membrane proteinQuickGO ontologyBLASTP
20489032049823921recombination associated proteinQuickGO ontologyBLASTP
2050078205015174tRNA-AspQuickGO ontologyBLASTP
2050426205049974tRNA-AspQuickGO ontologyBLASTP
205073620520491314putative integraseQuickGO ontologyBLASTP
205246220540421581hypothetical proteinBLASTP
205403920550731035hypothetical protein
205507020561281059hypothetical proteinBLASTP
20561252056973849hypothetical proteinBLASTP
205698120595962616hypothetical proteinBLASTP
20598182060150333putative transposaseQuickGO ontologyBLASTP
206022520612651041hypothetical proteinBLASTP
20613782061641264hypothetical proteinBLASTP
206185120634311581putative transposase subunit AQuickGO ontologyBLASTP
20634282064177750putative transposase subunit BQuickGO ontologyBLASTP
20646412065021381hypothetical proteinBLASTP
206534120666301290putative cytochrome C oxidase monoheme and diheme subunitsQuickGO ontologyBLASTP
206663420680311398putative cytochrome C subunit proteinQuickGO ontologyBLASTP
20680842068590507hypothetical protein
20685872068907321hypothetical proteinBLASTP
206895120701621212putative cytochrome C dehydrogenase-like proteinQuickGO ontologyBLASTP
20702462071238993hypothetical proteinBLASTP
20713972072293897putative LysR family regulatory proteinQuickGO ontologyBLASTP
207240920735781170putative transporter-like membrane proteinQuickGO ontologyBLASTP
20735872074195609hypothetical proteinBLASTP
207424120756681428putative cytochrome D oxidase subunit IQuickGO ontologyBLASTP
207567220766791008putative cytochrome D oxidase subunit IIQuickGO ontologyBLASTP
20768112077362552inorganic pyrophosphataseQuickGO ontologyBLASTP
207747720787601284phosphopyruvate hydrataseQuickGO ontologyBLASTP
20788342079187354hypothetical protein
20792792079545267hypothetical proteinBLASTP
20795882079911324hypothetical proteinBLASTP
20799952080360366hypothetical proteinBLASTP
208035720817031347putative chloride transporter-like membrane proteinQuickGO ontologyBLASTP
20819522082275324hypothetical proteinBLASTP
20824732082808336putative transposaseQuickGO ontologyBLASTP
208287020844171548putative transposaseQuickGO ontologyBLASTP
208463820857861149putative RNA-directed DNA polymeraseQuickGO ontologyBLASTP
208594920872051257hypothetical proteinBLASTP
208769920915923894hypothetical proteinBLASTP
209192020936441725hypothetical proteinBLASTP
20937792094063285hypothetical proteinBLASTP
209420120952531053putative traC-like DNA primaseQuickGO ontologyBLASTP
20953692095611243hypothetical protein
20960772096442366hypothetical protein
209645120980071557hypothetical proteinBLASTP
20980182098326309hypothetical proteinBLASTP
209833020997121383hypothetical proteinBLASTP
20997092100665957hypothetical proteinBLASTP
21007712101025255putative HTH-type regulatory proteinQuickGO ontologyBLASTP
21012762101467192hypothetical proteinBLASTP
210200021047502751hypothetical proteinBLASTP
21047502105166417putative lipoproteinQuickGO ontologyBLASTP
210512921066461518hypothetical proteinBLASTP
21066362107448813hypothetical proteinBLASTP
21074452108095651hypothetical proteinBLASTP
21080832108496414hypothetical proteinBLASTP