Pre_GI: BLASTP Hits

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Query: NC_012660:2045398:2072409 Pseudomonas fluorescens SBW25 chromosome, complete genome

Start: 2072409, End: 2073578, Length: 1170

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007005:1636875:1668346166834616695151170Pseudomonas syringae pv. syringae B728a, complete genomeC4-dicarboxylate transporter/malic acid transport protein1e-168592
NC_004578:5192110:5208901520890152100701170Pseudomonas syringae pv. tomato str. DC3000, complete genomeC4-dicarboxylate transporter/malic acid transport protein2e-168592
NC_016816:4129299:4160801416080141619611161Pantoea ananatis LMG 5342, complete genomeC4-dicarboxylate transporter/malic acid transport family protein1e-118426
NC_014304:77715:9694096940981001161Erwinia billingiae Eb661 plasmid pEB102, complete sequenceC4-dicarboxylate transporter/malic acid transport protein3e-118425
NC_014375:1242750:1254684125468412558801197Brevundimonas subvibrioides ATCC 15264 chromosome, complete genomeC4-dicarboxylate transporter/malic acid transport protein4e-117421
NC_009439:442890:4857414857414868951155Pseudomonas mendocina ymp, complete genomeC4-dicarboxylate transporter/malic acid transport protein1e-67257
NC_015850:1614965:1621547162154716227071161Acidithiobacillus caldus SM-1 chromosome, complete genomeC4-dicarboxylate transporter/malic acid transport protein4e-53209
NC_008537:12500:1447314473156601188Arthrobacter sp. FB24 plasmid 1, complete sequenceC4-dicarboxylate transporter/malic acid transport protein4e-31135
NC_021184:3149000:3166919316691931679711053Desulfotomaculum gibsoniae DSM 7213, complete genomeC4-dicarboxylate transporter/malic acid transport protein2e-21103
NC_013887:1383127:1395351139535113963731023Methanocaldococcus sp. FS406-22 chromosome, complete genomeC4-dicarboxylate transporter/malic acid transport protein6e-2098.6
NC_000868:757823:7603067603067613251020Pyrococcus abyssi GE5, complete genomeC4-dicarboxylate transporter, putative2e-1893.6
NC_015474:1794879:1801166180116618021851020Pyrococcus sp. NA2 chromosome, complete genomeC4-dicarboxylate transporter, putative6e-1892
NC_016109:4241591:4262819426281942639191101Kitasatospora setae KM-6054, complete genomeputative transporter3e-1273.6
NC_014659:3654979:3677057367705736781211065Rhodococcus equi 103S, complete genomeC4-dicarboxylate transporter/malic acid transport protein3e-1170.1