Pre_GI: BLASTP Hits

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Query: NC_012660:2045398:2100771 Pseudomonas fluorescens SBW25 chromosome, complete genome

Start: 2100771, End: 2101025, Length: 255

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016830:3869572:389216638921663892420255Pseudomonas fluorescens F113 chromosome, complete genometranscriptional xre family1e-40164
NC_007964:2762000:277306427730642773324261Nitrobacter hamburgensis X14, complete genometranscriptional regulator, XRE family4e-0960.1
NC_009667:1934818:194392819439281944158231Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequenceXRE family transcriptional regulator7e-0959.3
NC_012808:58701:745447454474837294Methylobacterium extorquens AM1, complete genomeTranscriptional regulator, XRE family5e-0856.6
NC_011146:3720658:374169537416953742027333Geobacter bemidjiensis Bem, complete genometranscriptional regulator, XRE family2e-0754.3
NC_008322:373531:373304373304373534231Shewanella sp. MR-7, complete genometranscriptional regulator, XRE family2e-0754.3
NC_012808:4137000:413802541380254138288264Methylobacterium extorquens AM1, complete genomehypothetical protein4e-0753.5
NC_010546:4923496:1108711087121721086Cyanothece sp. ATCC 51142 chromosome circular, complete sequencehypothetical protein6e-0753.1
NC_010120:1065833:107078010707801071133354Neisseria meningitidis 053442, complete genometranscriptional regulator7e-0752.8
NC_014624:1369642:137228713722871372838552Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein6e-0752.8
NC_015259:1803266:181078218107821810967186Polymorphum gilvum SL003B-26A1 chromosome, complete genomeTranscriptional regulator, XRE family1e-0651.6
NC_017025:1651870:166594816659481666286339Flavobacterium indicum GPTSA100-9, complete genometranscriptional regulator, XRE family1e-0651.6
NC_010622:249625:297861297861298133273Burkholderia phymatum STM815 chromosome 1, complete sequencetranscriptional regulator, XRE family2e-0651.2
NC_009667:1371924:137862013786201378910291Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequenceXRE family transcriptional regulator2e-0651.2
NC_016002:1975000:200038420003842000629246Pseudogulbenkiania sp. NH8B, complete genomeputative transcriptional regulator2e-0650.8
NC_017075:4880807:488612248861224886376255Rubrivivax gelatinosus IL144, complete genometranscriptional regulator, Xre family3e-0650.4
NC_007509:3668:235972359723938342Burkholderia sp. 383 chromosome 3, complete sequencetranscriptional regulator, XRE family5e-0649.7
NC_012912:1053618:106326310632631063553291Dickeya zeae Ech1591, complete genometranscriptional regulator, XRE family6e-0649.7
NC_004347:4007847:401423640142364014463228Shewanella oneidensis MR-1, complete genometranscriptional regulator, Cro/CI family7e-0649.3