Pre_GI Gene

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Host: NC_010501 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010501:4379920 Pseudomonas putida W619, complete genome

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida is a common endophytic and rhizosphere bacterium. Pseudomonas putida W619 was isolated from the Black Cottonwood tree and is closely related to other endophytic and rhizosphere strains of Pseudomonas putida. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
43799204380279360hypothetical proteinBLASTP
43804304380819390hypothetical proteinBLASTP
43808164381103288hypothetical proteinBLASTP
43811004381630531hypothetical protein
438161743829991383DnaB domain protein helicase domain proteinQuickGO ontologyBLASTP
43829964383778783IstB domain protein ATP-binding proteinQuickGO ontologyBLASTP
43837754384569795hypothetical proteinBLASTP
43845664384796231hypothetical protein
43847934385434642hypothetical proteinBLASTP
43854314386195765hypothetical proteinBLASTP
43861924386485294hypothetical protein
43864824386772291hypothetical protein
43867694387098330hypothetical protein
43879364388715780putative phage repressorQuickGO ontologyBLASTP
43888724389261390transcriptional regulator LuxR familyQuickGO ontologyBLASTP
43893524389765414carbon storage regulator CsrAQuickGO ontologyBLASTP
43902574390814558hypothetical proteinBLASTP
43908044391046243hypothetical proteinBLASTP
43911014391349249hypothetical protein
43913654391949585hypothetical protein
439291243939341023integrase family proteinQuickGO ontologyBLASTP
4393999439408890tRNA-SerQuickGO ontologyBLASTP
43941814394891711phosphoribosylaminoimidazole-succinocarboxamide synthaseQuickGO ontologyBLASTP
43949224395680759beta-lactamase domain proteinQuickGO ontologyBLASTP
439568143967991119lipoproteinQuickGO ontologyBLASTP
43968174397695879dihydrodipicolinate synthaseQuickGO ontologyBLASTP
43979564398516561glycine cleavage system transcriptional repressorQuickGO ontologyBLASTP
43985284399001474alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergenQuickGO ontologyBLASTP
439911644001861071protein of unknown function UPF0118QuickGO ontologyBLASTP
44002074400446240SirA family proteinQuickGO ontologyBLASTP
440056644020021437peptidase M48 Ste24pQuickGO ontologyBLASTP
440209744031551059quinolinate synthetase complex A subunitQuickGO ontologyBLASTP