Pre_GI: BLASTP Hits

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Query: NC_010501:4379920:4397956 Pseudomonas putida W619, complete genome

Start: 4397956, End: 4398516, Length: 561

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida is a common endophytic and rhizosphere bacterium. Pseudomonas putida W619 was isolated from the Black Cottonwood tree and is closely related to other endophytic and rhizosphere strains of Pseudomonas putida. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017986:4091051:409153640915364092096561Pseudomonas putida ND6 chromosome, complete genomeglycine cleavage system transcriptional repressor8e-94342
NC_016830:1645879:164749016474901648050561Pseudomonas fluorescens F113 chromosome, complete genomeprotein GcvR9e-78289
NC_012660:1579204:162053216205321621092561Pseudomonas fluorescens SBW25 chromosome, complete genomeputative regulatory protein7e-77286
NC_007005:1738500:174045517404551741018564Pseudomonas syringae pv. syringae B728a, complete genomeglycine cleavage system transcriptional repressor2e-74278
NC_018080:4436646:445550744555074456064558Pseudomonas aeruginosa DK2 chromosome, complete genomeglycine cleavage system transcriptional repressor2e-66251
NC_018012:1274500:128677712867771287316540Thiocystis violascens DSM 198 chromosome, complete genomeglycine cleavage system regulatory protein2e-24112
NC_013889:413909:433267433267433821555Thioalkalivibrio sp. K90mix chromosome, complete genomeamino acid-binding ACT domain protein4e-1271.2
NC_016613:2596464:259881325988132599355543Vibrio sp. EJY3 chromosome 1, complete sequenceglycine cleavage system transcriptional repressor8e-1166.6
NC_014541:1414627:143521814352181435757540Ferrimonas balearica DSM 9799 chromosome, complete genomeglycine cleavage system transcriptional repressor, putative6e-0650.4