Pre_GI: BLASTN Hits

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Query: NC_010501:4379920 Pseudomonas putida W619, complete genome

Start: 4379920, End: 4403155, Length: 23236

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida is a common endophytic and rhizosphere bacterium. Pseudomonas putida W619 was isolated from the Black Cottonwood tree and is closely related to other endophytic and rhizosphere strains of Pseudomonas putida. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_007005:1738500*1738500176475226253Pseudomonas syringae pv. syringae B728a, complete genome01003BLASTN svgBLASTP svg
NC_002516:1031386*1031386109196460579Pseudomonas aeruginosa PAO1, complete genome0696BLASTN svgBLASTP svg
NC_012660:1579204*1579204162109241889Pseudomonas fluorescens SBW25 chromosome, complete genome0648BLASTN svgBLASTP svg
NC_004578:4465247*4465247448346018214Pseudomonas syringae pv. tomato str. DC3000, complete genome1e-125458BLASTN svgBLASTP svg
NC_015410:3502099*3502099352815926061Pseudomonas mendocina NK-01 chromosome, complete genome1e-79305BLASTN svgBLASTP svg
NC_013889:21682921682923559918771Thioalkalivibrio sp. K90mix chromosome, complete genome2e-25125BLASTN svgBLASTP svg
NC_004578:44329834432983445709924117Pseudomonas syringae pv. tomato str. DC3000, complete genome1e-23119BLASTN svgBLASTP svg
NC_019902:49850049850052359925100Thioalkalivibrio nitratireducens DSM 14787, complete genome5e-20107BLASTN svgBLASTP svg
NC_013851:2729000*2729000275222523226Allochromatium vinosum DSM 180 chromosome, complete genome3e-18101BLASTN svgBLASTP svg
NC_014541:14146271414627144361328987Ferrimonas balearica DSM 9799 chromosome, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_008027:38443553844355388629641942Pseudomonas entomophila L48, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_008027:4953432*4953432497941825987Pseudomonas entomophila L48, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_010501:4989455*4989455501446425010Pseudomonas putida W619, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_015733:42539614253961427610922149Pseudomonas putida S16 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_008027:4280000*4280000430482424825Pseudomonas entomophila L48, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_011770:860944*86094490509944156Pseudomonas aeruginosa LESB58, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_013889:413909*41390943968925781Thioalkalivibrio sp. K90mix chromosome, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_018868:12717421271742129953427793Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_015733:1793399*1793399181802124623Pseudomonas putida S16 chromosome, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_008027:2621443*2621443264643624994Pseudomonas entomophila L48, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_008027:77589677589680259926704Pseudomonas entomophila L48, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_011901:1122357*1122357114576023404Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete5e-1177.8BLASTN svgBLASTP svg
NC_010501:25118872511887254627834392Pseudomonas putida W619, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_013209:2032500*2032500205574623247Acetobacter pasteurianus IFO 3283-01, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_019940:2893535*2893535291820624672Thioflavicoccus mobilis 8321 chromosome, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_015733:5955467*5955467598799932533Pseudomonas putida S16 chromosome, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_009512:31189073118907313838119475Pseudomonas putida F1, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_015733:21946762194676221628521610Pseudomonas putida S16 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_014733:18570201857020189477137752Methylovorus sp. MP688 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010002:35095063509506354477335268Delftia acidovorans SPH-1, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_008786:18688186884262323936Verminephrobacter eiseniae EF01-2, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_009512:755658*75565878272327066Pseudomonas putida F1, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015733:35958823595882362033824457Pseudomonas putida S16 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_010804:2206000*2206000222893422935Burkholderia multivorans ATCC 17616 chromosome 1, complete4e-0867.9BLASTN svgBLASTP svg
NC_009512:15181131518113155588037768Pseudomonas putida F1, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_003197:815964*81596483952123558Salmonella typhimurium LT2, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_006905:848000*84800086575317754Salmonella enterica subsp. enterica serovar Choleraesuis str2e-0765.9BLASTN svgBLASTP svg
NC_008027:3953951*3953951397851024560Pseudomonas entomophila L48, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_009648:838000*83800086209024091Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010102:2287934*2287934231106023127Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,2e-0765.9BLASTN svgBLASTP svg
NC_011080:819103*81910384387224770Salmonella enterica subsp. enterica serovar Newport str. SL254,2e-0765.9BLASTN svgBLASTP svg
NC_011083:862901*86290188778924889Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,2e-0765.9BLASTN svgBLASTP svg
NC_011149:779903*77990380318023278Salmonella enterica subsp. enterica serovar Agona str. SL483,2e-0765.9BLASTN svgBLASTP svg
NC_008027:2051821*2051821207333821518Pseudomonas entomophila L48, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_010501:54420005442000546540823409Pseudomonas putida W619, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010125:3506955*3506955353159924645Gluconacetobacter diazotrophicus PAl 5, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_002937:19157871915787193430218516Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete3e-0661.9BLASTN svgBLASTP svg