Pre_GI: BLASTP Hits

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Query: NC_010501:4379920:4389352 Pseudomonas putida W619, complete genome

Start: 4389352, End: 4389765, Length: 414

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida is a common endophytic and rhizosphere bacterium. Pseudomonas putida W619 was isolated from the Black Cottonwood tree and is closely related to other endophytic and rhizosphere strains of Pseudomonas putida. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012880:1127997:114273211427321142917186Dickeya dadantii Ech703, complete genomecarbon storage regulator, CsrA2e-0857.8
NC_013592:3618248:362182636218263622011186Dickeya dadantii Ech586, complete genomecarbon storage regulator, CsrA2e-0857.8
NC_020541:2769419:279027827902782790481204Rhodanobacter sp. 2APBS1, complete genomecarbon storage regulator CsrA2e-0857.8
NC_014109:27500:470944709447273180Candidatus Riesia pediculicola USDA chromosome, complete genomecarbon storage regulator3e-0857.4
NC_007517:480303:485123485123485359237Geobacter metallireducens GS-15, complete genomecarbon storage regulator, CsrA3e-0857.4
NC_014098:3030274:304985130498513050114264Bacillus tusciae DSM 2912 chromosome, complete genomecarbon storage regulator, CsrA1e-0755.1
NC_019978:2260395:227347822734782273708231Halobacteroides halobius DSM 5150, complete genomecarbon storage regulator CsrA2e-0754.7
NC_018080:2288700:231320523132052313384180Pseudomonas aeruginosa DK2 chromosome, complete genomecarbon storage regulator2e-0754.3
NC_020134:2772500:277704127770412777307267Clostridium stercorarium subsp. stercorarium DSM 8532, completecarbon storage regulator4e-0753.1
NC_011653:466007:476799476799477020222Thermosipho africanus TCF52B, complete genomecarbon storage regulator6e-0752.8
NC_019897:128610:178515178515178757243Thermobacillus composti KWC4 chromosome, complete genomecarbon storage regulator CsrA7e-0752.8
NC_015460:1687684:170857717085771708765189Gallibacterium anatis UMN179 chromosome, complete genomecarbon storage regulator1e-0652.4
NC_004578:4432983:445413944541394454333195Pseudomonas syringae pv. tomato str. DC3000, complete genomecarbon storage regulator, putative9e-0752.4
NC_008011:924392:933304933304933993690Lawsonia intracellularis PHE/MN1-00, complete genomehypothetical protein1e-0652
NC_018664:239000:253889253889254218330Clostridium acidurici 9a chromosome, complete genomecarbon storage regulator1e-0651.6
NC_012914:6583000:660219766021976602436240Paenibacillus sp. JDR-2, complete genomecarbon storage regulator, CsrA2e-0651.6
NC_007759:1356439:137836113783611378600240Syntrophus aciditrophicus SB, complete genomecarbon storage regulator2e-0651.2
NC_019896:577594:588729588729588953225Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completeCarbon storage regulator - like protein2e-0650.8
NC_014829:3877701:388161838816183881845228Bacillus cellulosilyticus DSM 2522 chromosome, complete genomecarbon storage regulator, CsrA3e-0650.4
NC_009656:2422083:242839924283992428770372Pseudomonas aeruginosa PA7 chromosome, complete genomeregulatory protein7e-0649.3
NC_004129:5204500:521390452139045214092189Pseudomonas fluorescens Pf-5, complete genomecarbon storage regulator1e-0548.9
NC_005773:4028500:404662040466204046808189Pseudomonas syringae pv. phaseolicola 1448A, complete genomecarbon storage regulator1e-0548.9