Pre_GI Gene

Some Help

Host: NC_009831 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009831:5107924 Shewanella sediminis HAW-EB3, complete genome

Host Lineage: Shewanella sediminis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Shewanella sediminis was isolated from sediment taken at a depth of 215 meters from an unexploded-ordinance-dumping site 50 nautical miles from Halifax Harbor, Canada in the Atlantic Ocean. This organism is able to degrade hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) anaerobically at 10 degrees C. RDX is a member of a family of nitramine compounds which are used in the production of explosives. Shewanella are facultatively anaerobic, Gram-negative bacteria, motile by polar flagella, rod-like, and generally associated with aquatic or marine environments.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
51079245108403480transcriptional regulator AsnC familyQuickGO ontologyBLASTP
510874351101011359sodiumneurotransmitter symporterQuickGO ontologyBLASTP
511033651123392004TonB-dependent copper receptorQuickGO ontologyBLASTP
511250051139361437aspartate kinaseQuickGO ontologyBLASTP
51141575114594438ankyrin repeat protein putativeQuickGO ontologyBLASTP
511471051158521143Serine--pyruvate transaminaseQuickGO ontologyBLASTP
511612951176791551threonine dehydratase biosyntheticQuickGO ontologyBLASTP
511768151195311851Dihydroxy-acid dehydrataseQuickGO ontologyBLASTP
51197005120623924branched-chain amino acid aminotransferaseQuickGO ontologyBLASTP
51207085120968261acetolactate synthase small subunitQuickGO ontologyBLASTP
512103951227121674acetolactate synthase large subunit biosynthetic typeQuickGO ontologyBLASTP
512330651247871482Ketol-acid reductoisomeraseQuickGO ontologyBLASTP
51250115125883873transcriptional regulator LysR familyQuickGO ontologyBLASTP
51259705126797828extracellular solute-binding protein family 3QuickGO ontologyBLASTP
51269305127733804diguanylate cyclaseQuickGO ontologyBLASTP