Pre_GI: BLASTP Hits

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Query: NC_009831:5107924:5110336 Shewanella sediminis HAW-EB3, complete genome

Start: 5110336, End: 5112339, Length: 2004

Host Lineage: Shewanella sediminis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Shewanella sediminis was isolated from sediment taken at a depth of 215 meters from an unexploded-ordinance-dumping site 50 nautical miles from Halifax Harbor, Canada in the Atlantic Ocean. This organism is able to degrade hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) anaerobically at 10 degrees C. RDX is a member of a family of nitramine compounds which are used in the production of explosives. Shewanella are facultatively anaerobic, Gram-negative bacteria, motile by polar flagella, rod-like, and generally associated with aquatic or marine environments.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010506:537833:5598925598925618801989Shewanella woodyi ATCC 51908, complete genomeTonB-dependent copper receptor01083
NC_018691:3437821:3439688343968834417662079Alcanivorax dieselolei B5 chromosome, complete genomePutative copper transport outer membrane porin OprC3e-121436
NC_007650:722961:7439437439437462042262Burkholderia thailandensis E264 chromosome II, complete sequenceTonB-dependent copper receptor2e-119430
NC_009850:628024:6280246280246301802157Arcobacter butzleri RM4018, complete genomeTonB-dependent receptor protein9e-115414
NC_010410:3719599:3736103373610337382172115Acinetobacter baumannii AYE, complete genomeputative outer membrane copper receptor (OprC)2e-112407
NC_010611:208268:2117642117642138782115Acinetobacter baumannii ACICU, complete genomeOuter membrane receptor protein, mostly Fe transport3e-112406
NC_013421:3237633:3242575324257532445842010Pectobacterium wasabiae WPP163, complete genomeTonB-dependent copper receptor2e-108393
NC_012214:1974500:2010242201024220123052064Erwinia pyrifoliae Ep1/96, complete genomeTonB dependent receptor1e-97357
NC_008576:4467745:4471636447163644737232088Magnetococcus sp. MC-1, complete genomeTonB-dependent copper receptor1e-71271
NC_009715:1923676:1943670194367019456671998Campylobacter curvus 525.92 chromosome, complete genomenitrilase/cyanide hydratase and apolipoprotein N-acyltransferase1e-66254
NC_012438:565419:5683905683905704922103Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomeouter membrane protein C1e-28128
NC_013166:1841446:1843284184328418453712088Kangiella koreensis DSM 16069, complete genomeTonB-dependent receptor4e-25117
NC_011059:1391734:1398678139867814007742097Prosthecochloris aestuarii DSM 271, complete genomeTonB-dependent receptor8e-24112
NC_011026:2624775:2642802264280226449402139Chloroherpeton thalassium ATCC 35110, complete genomeTonB-dependent receptor plug3e-1790.5
NC_003910:486776:4867764867764890252250Colwellia psychrerythraea 34H, complete genomeTonB-dependent receptor7e-1479.7
NC_017192:2153461:2162364216236421644362073Arcobacter sp. L, complete genomeTonB-dependent receptor1e-1275.5
NC_014315:2711852:2729176272917627313322157Nitrosococcus watsoni C-113 chromosome, complete genomeTonB-dependent receptor2e-0861.6
NC_004347:4211241:4229648422964842317742127Shewanella oneidensis MR-1, complete genomeTonB-dependent receptor, putative2e-0861.2
NC_007484:580106:5801065801065822622157Nitrosococcus oceani ATCC 19707, complete genomeTonB-dependent receptor6e-0859.7
NC_013416:1783349:1800641180064118025931953Aggregatibacter actinomycetemcomitans D11S-1, complete genomeouter membrane protein 641e-0758.5
NC_016513:16721:2621026210281621953Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeouter membrane protein 641e-0758.5