Pre_GI: BLASTP Hits

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Query: NC_009831:5107924:5125970 Shewanella sediminis HAW-EB3, complete genome

Start: 5125970, End: 5126797, Length: 828

Host Lineage: Shewanella sediminis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Shewanella sediminis was isolated from sediment taken at a depth of 215 meters from an unexploded-ordinance-dumping site 50 nautical miles from Halifax Harbor, Canada in the Atlantic Ocean. This organism is able to degrade hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) anaerobically at 10 degrees C. RDX is a member of a family of nitramine compounds which are used in the production of explosives. Shewanella are facultatively anaerobic, Gram-negative bacteria, motile by polar flagella, rod-like, and generally associated with aquatic or marine environments.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004347:4541742:454612945461294546671543Shewanella oneidensis MR-1, complete genomehypothetical protein3e-40165
NC_004347:4541742:454583545458354546095261Shewanella oneidensis MR-1, complete genomehypothetical ABC-type amino acid transport protein2e-1479.7
NC_009831:3092126:309510630951063095924819Shewanella sediminis HAW-EB3, complete genomeextracellular solute-binding protein, family 35e-1272
NC_007645:2049988:205722720572272057985759Hahella chejuensis KCTC 2396, complete genomeABC-type amino acid transport/signal transduction systems, periplasmic component/domain8e-0961.2
NC_015276:1426000:1434519143451914362521734Marinomonas mediterranea MMB-1 chromosome, complete genomehistidine kinase3e-0652.4