Pre_GI Gene

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Host: NC_008543 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008543:127675 Burkholderia cenocepacia HI2424 chromosome 2, complete sequence

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism (HI2424; BCC1) was isolated as part of a study to find this organism in natural environments. Samples taken from fields that were planted with onions in New York in 1999 and 2000 were examined and it was discovered that isolates were the same as ones that can infect CF patients. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
127675128526852binding-protein-dependent transport systems inner membrane componentQuickGO ontologyBLASTP
1285631305331971Beta-galactosidaseQuickGO ontologyBLASTP
1305381318331296major facilitator superfamily MFS_1QuickGO ontologyBLASTP
1318771330401164Arabinogalactan endo-14-beta-galactosidaseQuickGO ontologyBLASTP
133318133789472BLASTP
133809134117309hypothetical proteinBLASTP
134130134774645Acyl-carrier-protein phosphodiesteraseQuickGO ontologyBLASTP
134826135269444hypothetical proteinBLASTP
135412136362951Integrase catalytic regionQuickGO ontologyBLASTP
136451137005555hypothetical proteinBLASTP
137333138196864hypothetical proteinBLASTP
138291139088798IstB domain protein ATP-binding proteinQuickGO ontologyBLASTP
1390811405861506Integrase catalytic regionQuickGO ontologyBLASTP
140888141151264transposase IS3IS911 family proteinQuickGO ontologyBLASTP
141148141987840Integrase catalytic regionQuickGO ontologyBLASTP
142253142480228hypothetical proteinBLASTP
142562143050489GCN5-related N-acetyltransferaseQuickGO ontologyBLASTP
143047143316270conserved hypothetical protein with unknown functionQuickGO ontologyBLASTP
143649143891243BLASTP
143946144128183BLASTP
144140144958819Integrase catalytic regionQuickGO ontologyBLASTP
145238145375138transposaseQuickGO ontologyBLASTP
1453801463961017Integrase catalytic regionQuickGO ontologyBLASTP
146447147178732Integrase catalytic regionQuickGO ontologyBLASTP
147175147576402transposase IS3IS911 family proteinQuickGO ontologyBLASTP
148123148770648Lytic transglycosylase catalyticQuickGO ontologyBLASTP
148822149079258hypothetical protein
149168149488321type IV secretory pathway VirB3 family proteinQuickGO ontologyBLASTP
1494901519702481type IV secretionconjugal transfer ATPase VirB4 familyQuickGO ontologyBLASTP
1519671531181152TrbLVirB6 plasmid conjugal transfer proteinQuickGO ontologyBLASTP