Pre_GI: BLASTP Hits

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Query: NC_008543:127675:149490 Burkholderia cenocepacia HI2424 chromosome 2, complete sequence

Start: 149490, End: 151970, Length: 2481

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism (HI2424; BCC1) was isolated as part of a study to find this organism in natural environments. Samples taken from fields that were planted with onions in New York in 1999 and 2000 were examined and it was discovered that isolates were the same as ones that can infect CF patients. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008061:2106848:2117799211779921202792481Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencetype IV secretion/conjugal transfer ATPase, VirB4 family01704
NC_011001:372185:3810183810183834982481Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative type IV secretion system protein VirB401681
NC_010515:1124298:1135251113525111377312481Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencetype IV secretion/conjugal transfer ATPase, VirB4 family01674
NC_010676:2793237:2793237279323727957022466Burkholderia phytofirmans PsJN chromosome 2, complete sequencetype IV secretion/conjugal transfer ATPase, VirB4 family01282
NC_009254:365812:3658123658123682802469Burkholderia vietnamiensis G4 chromosome 3, complete sequencetype IV secretion/conjugal transfer ATPase01237
NC_010524:933191:9346559346559371472493Leptothrix cholodnii SP-6, complete genometype IV secretion/conjugal transfer ATPase, VirB4 family0741
NC_011071:2733438:2745103274510327475502448Stenotrophomonas maltophilia R551-3, complete genometype IV secretion/conjugal transfer ATPase, VirB4 family0681
NC_015947:2752450:2763456276345627659032448Burkholderia sp. JV3 chromosome, complete genometype IV secretion/conjugal transfer ATPase, VirB4 family0679
NC_010943:3034366:3043399304339930458462448Stenotrophomonas maltophilia K279a, complete genomeputative type IV secretion conjugal transfer protein0669
NC_010688:1908012:1937139193713919395922454Xanthomonas campestris pv. campestris, complete genometype IV secretion system energizing component VirB40664
NC_007086:1936505:1964408196440819668612454Xanthomonas campestris pv. campestris str. 8004, complete genomeVirB4 protein0660
NC_003902:2933121:2943358294335829458112454Xanthomonas campestris pv. campestris str. ATCC 33913, completeVirB4 protein0660
NC_017271:2935643:2964110296411029665512442Xanthomonas campestris pv. raphani 756C chromosome, completeVirB4 protein0657
NC_013722:2150882:2156995215699521594662472Xanthomonas albilineans, complete genomeprobable type iv secretion system protein virb40647
NC_003919:3060484:3079127307912730815802454Xanthomonas axonopodis pv. citri str. 306, complete genomeVirB4 protein0646
NC_011985:3869998:3871859387185938742462388Agrobacterium radiobacter K84 chromosome 1, complete genometype IV secretion protein AvhB41e-156554
NC_016513:2103958:2125571212557121283422772Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeATPase2e-154546
NC_010170:3908500:3916385391638539188292445Bordetella petrii, complete genometype IV secretion system protein VirB48e-147521
NC_013592:2968500:2998530299853030012742745Dickeya dadantii Ech586, complete genomeCagE, TrbE, VirB component of type IV transporter system, conserved region5e-135482
NC_016929:109500:1131401131401155572418Rickettsia canadensis str. CA410 chromosome, complete genometype IV secretion system ATPase VirB41e-130467
NC_009879:107890:1122791122791146962418Rickettsia canadensis str. McKiel, complete genomeType IV secretion/conjugal transfer ATPase, VirB4 family protein1e-130467
NC_017028:180219:1951301951301975472418Candidatus Rickettsia amblyommii str. GAT-30V chromosome, completetype IV secretion system ATPase VirB42e-129463
NC_016818:1795576:1829965182996518327122748Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completetype IV secretory pathway, VirB4 component5e-129462
NC_011283:1811000:1847938184793818506852748Klebsiella pneumoniae 342 chromosome, complete genometype IV secretion/conjugal transfer ATPase1e-128461
NC_009792:859228:8810098810098837472739Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein1e-128461
NC_020181:473170:4949524949524976902739Enterobacter aerogenes EA1509E, complete genomeATPase provides energy for both assembly of type IV secretion complex and secretion of T-DNA complex (VirB4)1e-128461
NC_004547:1873390:1874142187414218768892748Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative conjugal transfer protein7e-129461
NC_000963:110500:1140231140231164402418Rickettsia prowazekii str. Madrid E, complete genomeVIRB4 PROTEIN PRECURSOR (virB4)2e-128460
NC_017050:110500:1140211140211164382418Rickettsia prowazekii str. Katsinyian chromosome, complete genometype IV secretion system ATPase VirB42e-128460
NC_017048:452000:4560924560924585092418Rickettsia prowazekii str. GvV257 chromosome, complete genometype IV secretion system ATPase VirB42e-128460
NC_017049:109000:1122221122221146392418Rickettsia prowazekii str. Chernikova chromosome, complete genometype IV secretion system ATPase VirB42e-128460
NC_017051:109000:1122251122251146422418Rickettsia prowazekii str. Dachau chromosome, complete genometype IV secretion system ATPase VirB42e-128460
NC_017056:110500:1140311140311164482418Rickettsia prowazekii str. BuV67-CWPP chromosome, complete genometype IV secretion system ATPase VirB42e-128460
NC_017057:110000:1141481141481165652418Rickettsia prowazekii str. RpGvF24 chromosome, complete genometype IV secretion system ATPase VirB42e-128460
NC_017044:130000:1353941353941378112418Rickettsia parkeri str. Portsmouth chromosome, complete genometype IV secretion system ATPase VirB44e-128459
NC_012731:3411161:3450241345024134529792739Klebsiella pneumoniae NTUH-K2044 chromosome, complete genometype IV secretory pathway VirB3-4 component7e-128458
NC_006142:33268:4454644546469632418Rickettsia typhi str. Wilmington, complete genomeVirB4 protein precursor6e-128458
NC_017062:33268:4451344513469302418Rickettsia typhi str. B9991CWPP chromosome, complete genometype IV secretion system ATPase VirB46e-128458
NC_017066:33268:4454644546469632418Rickettsia typhi str. TH1527 chromosome, complete genometype IV secretion system ATPase VirB46e-128458
NC_014500:3097362:3147941314794131507212781Dickeya dadantii 3937 chromosome, complete genomeATPase provides energy for both assembly of type IV secretion complex and secretion of T-DNA complex (VirB4)4e-127456
NC_012912:1701231:1705041170504117077882748Dickeya zeae Ech1591, complete genomeCagE TrbE VirB component of type IV transporter system5e-127456
NC_017047:2079368:2079368207936820821152748Rahnella aquatilis HX2 chromosome, complete genomeputative conjugal transfer protein6e-127455
NC_016845:3448881:3469356346935634720942739Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative type IV secretory pathway VirB4 component2e-126453
NC_010688:1908012:1944292194429219458151524Xanthomonas campestris pv. campestris, complete genomeVirB4 protein3e-123443
NC_014801:1:2335823358261262769Campylobacter jejuni subsp. jejuni ICDCCJ07001 plasmid pTet,type IV secretion system protein VirB43e-122440
NC_007354:756500:7787647787647811662403Ehrlichia canis str. Jake, complete genomeCagE, TrbE, VirB family component of typeIV transporter system6e-122439
NC_007799:474931:4813444813444837462403Ehrlichia chaffeensis str. Arkansas, complete genometype IV secretion system protein VirB46e-122438
NC_010793:794494:7995707995708019872418Orientia tsutsugamushi str. Ikeda, complete genometype IV secretion system protein VirB47e-122438
NC_009488:1871912:1877046187704618794632418Orientia tsutsugamushi str. Boryong, complete genometype IV secretion system ATPase VirB41e-121438
NC_005295:873500:8983268983269007282403Ehrlichia ruminantium str. Welgevonden, complete genometype IV secretion system protein VirB43e-120433
NC_006832:853500:8778888778888802932406Ehrlichia ruminantium str. Welgevonden, complete genomeVIRB4 protein precursor3e-120433
NC_006831:849500:8734978734978759022406Ehrlichia ruminantium str. Gardel, complete genomeVIRB4 protein precursor3e-120433
NC_011092:76993:8981789817925672751Salmonella enterica subsp. enterica serovar Schwarzengrund strTriC protein3e-118426
NC_007798:758873:7709267709267733372412Neorickettsia sennetsu str. Miyayama, complete genometype IV secretion system protein VirB43e-117423
NC_015593:1587684:1602558160255816049302373Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completetype IV secretion/conjugal transfer ATPase VirB4 family6e-117422
NC_015675:6276357:6333713633371363360822370Mesorhizobium opportunistum WSM2075 chromosome, complete genometype IV secretion/conjugal transfer ATPase, VirB4 family5e-111402
NC_014923:5765660:5779042577904257814112370Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completetype IV secretion/conjugal transfer ATPase, VirB4 family5e-111402
NC_019973:5694620:5708002570800257103712370Mesorhizobium australicum WSM2073, complete genometype IV secretion/conjugal transfer ATPase, VirB4 family5e-111402
NC_014914:127873:1317401317401341452406Taylorella equigenitalis MCE9 chromosome, complete genomeVirB4 ATPase like protein2e-97357
NC_013416:939668:9496729496729512131542Aggregatibacter actinomycetemcomitans D11S-1, complete genomeATPase7e-95348
NC_016626:1699500:1740570174057017432332664Burkholderia sp. YI23 plasmid byi_1p, complete sequenceType IV secretion system protein VirB47e-64246
NC_006833:976010:9866539866539890072355Wolbachia endosymbiont strain TRS of Brugia malayi, completeType IV secretory pathway, VirB4 components2e-47191
NC_012751:409333:4299644299644310671104Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completeVirB4 conjugal transfer protein8e-34146
NC_004842:950058:9562099562099586382430Anaplasma marginale str. St. Maries, complete genomeVirB4 protein4e-33144
NC_012026:960000:9603409603409627692430Anaplasma marginale str. Florida, complete genomeVirB4 protein4e-33144
NC_015410:3209954:3207528320752832099572430Pseudomonas mendocina NK-01 chromosome, complete genomeconjugal transfer ATPase TrbE8e-29129
NC_016616:2699350:2726787272678727293782592Dechlorosoma suillum PS chromosome, complete genometype IV secretory pathway, VirB4 component1e-28129
NC_015186:2839668:2860699286069928634192721Acidiphilium multivorum AIU301, complete genomeconjugal transfer protein TrbE1e-28129
NC_015850:2048251:2076658207665820790212364Acidithiobacillus caldus SM-1 chromosome, complete genometype IV secretory pathway VirB4 components-like protein1e-28129
NC_010170:4800000:4880844488084448833062463Bordetella petrii, complete genomeconjugal transfer protein TrbE2e-28127
NC_014500:894136:8941368941368966042469Dickeya dadantii 3937 chromosome, complete genomeConjugative transfer protein TrbE3e-28127
NC_018691:3082000:3099974309997431024242451Alcanivorax dieselolei B5 chromosome, complete genomeATPase5e-28127
NC_015556:2265940:2265940226594022683692430Pseudomonas fulva 12-X chromosome, complete genomeCagE, TrbE, VirB component of type IV transporter system, conserved region6e-28126
NC_013422:1755875:1755875175587517583342460Halothiobacillus neapolitanus c2, complete genomeCagE, TrbE, VirB component of type IV transporter system, conserved region1e-27125
NC_010002:2933909:2964490296449029669612472Delftia acidovorans SPH-1, complete genomeAAA ATPase4e-27123
NC_008577:1489643:1495263149526314977132451Shewanella sp. ANA-3 chromosome 1, complete sequenceAAA ATPase6e-27123
NC_003295:2787371:2787371278737127898212451Ralstonia solanacearum GMI1000, complete genomePROBABLE CONJUGAL TRANSFER PROTEIN TRBE1e-26122
NC_009719:1972545:1988312198831219907382427Parvibaculum lavamentivorans DS-1 chromosome, complete genomeconjugal transfer ATPase TrbE2e-26122
NC_015381:2859000:2877033287703328794832451Burkholderia gladioli BSR3 chromosome 1, complete sequenceATPase2e-26122
NC_011992:3752867:3752867375286737553382472Acidovorax ebreus TPSY, complete genomeCagE TrbE VirB component of type IV transporter system2e-26121
NC_015221:12389:1238912389149232535Nitrosomonas sp. AL212 plasmid pNAL21202, complete sequencetype IV secretion/conjugal transfer ATPase, VirB4 family8e-26119
NC_015385:1875671:1875671187567118782442574Treponema succinifaciens DSM 2489 chromosome, complete genomeAAA ATPase4e-25117
NC_015386:125499:1367791367791393552577Treponema succinifaciens DSM 2489 plasmid pTRESU01, completeCagE, TrbE, VirB component of type IV transporter system, conserved region3e-24114
NC_009656:3817261:3838044383804438404972454Pseudomonas aeruginosa PA7 chromosome, complete genomeconjugal transfer ATPase TrbE7e-24113
NC_014910:2930860:2930860293086029333192460Alicycliphilus denitrificans BC chromosome, complete genomecage, trbe, virb component of type iv transporter system, conserved region protein8e-24112
NC_015422:1643000:1663023166302316654762454Alicycliphilus denitrificans K601 chromosome, complete genomeCagE, TrbE, VirB component of type IV transporter system, conserved region8e-24112
NC_008686:1439328:1441768144176814442782511Paracoccus denitrificans PD1222 chromosome 1, complete sequenceAAA ATPase1e-21105
NC_015942:1889421:1889881188988118924332553Acidithiobacillus ferrivorans SS3 chromosome, complete genomeCagE, TrbE, VirB component of type IV transporter system1e-21105
NC_009720:4406991:4425146442514644275842439Xanthobacter autotrophicus Py2, complete genomeconjugal transfer ATPase TrbE7e-21103
NC_011206:1293880:1291361129136112938832523Acidithiobacillus ferrooxidans ATCC 53993, complete genomeCagE TrbE VirB component of type IV transporter system4e-21103
NC_007950:206474:2165752165752191272553Polaromonas sp. JS666 plasmid 2, complete sequenceType IV secretory pathway VirB4 components-like4e-21103
NC_010125:2813653:2834802283480228372342433Gluconacetobacter diazotrophicus PAl 5, complete genomeputative conjugal transfer protein; TrbE4e-21103
NC_009720:670853:6708536708536732822430Xanthobacter autotrophicus Py2, complete genomeconjugal transfer ATPase TrbE2e-20101
NC_012483:3731542:3781113378111337834792367Acidobacterium capsulatum ATCC 51196, complete genometype IV secretion/conjugal transfer ATPase, VirB4 family3e-20101
NC_014834:959986:9776529776529801172466Rhodopseudomonas palustris DX-1 chromosome, complete genomeAAA ATPase3e-20100
NC_009937:4392108:4411982441198244144202439Azorhizobium caulinodans ORS 571, complete genomeATPase precursor5e-20100
NC_014834:3472000:3503841350384135062822442Rhodopseudomonas palustris DX-1 chromosome, complete genometype IV transporter subunit CagE/TrbE/VirB8e-2099.8
NC_017361:930280:9679779679779704752499Helicobacter pylori SouthAfrica7 chromosome, complete genomeDNA transfer protein9e-2099.4
NC_006371:1743982:1748726174872617511222397Photobacterium profundum SS9 chromosome 2, complete sequencehypothetical TrbE protein2e-1998.2
NC_010338:4148667:4148667414866741511232457Caulobacter sp. K31, complete genomeAAA ATPase2e-1998.2
NC_010698:870312:9080599080599105572499Helicobacter pylori Shi470, complete genomeDNA transfer protein3e-1997.8
NC_014834:614890:6148906148906173312442Rhodopseudomonas palustris DX-1 chromosome, complete genometype IV transporter subunit CagE/TrbE/VirB3e-1997.4
NC_017367:278916:2876102876102901082499Helicobacter pylori F57, complete genomeDNA transfer protein4e-1997.4
NC_017379:1035464:1054184105418410566822499Helicobacter pylori Puno135 chromosome, complete genomeDNA transfer protein5e-1997.1
NC_008757:77023:97607976071000722466Polaromonas naphthalenivorans CJ2 plasmid pPNAP01, completeType IV secretory pathway VirB4 components-like protein8e-1996.3
NC_017376:57500:9483294832973302499Helicobacter pylori SNT49 chromosome, complete genomeDNA transfer protein8e-1996.3
NC_009720:3317642:3338681333868133411192439Xanthobacter autotrophicus Py2, complete genomeconjugal transfer ATPase TrbE8e-1996.3
NC_010125:1011430:1030697103069710331232427Gluconacetobacter diazotrophicus PAl 5, complete genomeputative conjugal transfer protein trbE1e-1895.9
NC_009720:813157:8327138327138351512439Xanthobacter autotrophicus Py2, complete genomeconjugal transfer ATPase TrbE2e-1895.5
NC_008781:2611702:2636646263664626390902445Polaromonas naphthalenivorans CJ2, complete genomeCagE, TrbE, VirB component of type IV transporter system1e-1895.5
NC_011365:1135750:1136493113649311389192427Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeconjugal transfer ATPase TrbE2e-1895.1
NC_017358:220900:2311372311372336352499Helicobacter pylori Cuz20 chromosome, complete genomeDNA transfer protein4e-1894
NC_017371:1030148:1034552103455210364771926Helicobacter pylori Gambia94/24 chromosome, complete genomeDNA transfer protein1e-1792.8
NC_013192:1033177:1054164105416410566472484Leptotrichia buccalis DSM 1135, complete genomeCagE TrbE VirB component of type IV transporter system1e-1792.4
NC_010725:3315007:3312572331257233150102439Methylobacterium populi BJ001, complete genomeAAA ATPase1e-1792
NC_015437:697051:7258257258257282902466Selenomonas sputigena ATCC 35185 chromosome, complete genomeAAA ATPase5e-1790.5
NC_007925:3911323:3930710393071039331512442Rhodopseudomonas palustris BisB18, complete genomeATPase9e-1789.4
NC_010682:1593108:1614519161451916169662448Ralstonia pickettii 12J chromosome 1, complete sequencetype IV secretory pathway VirB4 components-like protein8e-1686.7
NC_017372:748097:7931967931967957782583Helicobacter pylori India7 chromosome, complete genomeVirB4 type IV secretion ATPase1e-1585.5
NC_009668:529175:5351505351505376602511Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequenceconjugal transfer ATPase TrbE4e-1584.3
NC_014256:485969:5220375220375246132577Helicobacter pylori B8 chromosome, complete genometype IV secretion system protein VirB45e-1583.6
NC_011498:1391788:1397130139713013997062577Helicobacter pylori P12, complete genomeVirB4 type IV secretion ATPase1e-1482.4
NC_017371:1470582:1516315151631515188912577Helicobacter pylori Gambia94/24 chromosome, complete genomeVirB4 type IV secretion ATPase2e-1482
NC_013861:3341955:3359877335987733624142538Legionella longbeachae NSW150, complete genomeConjugal transfer protein trbE precursor2e-1378.6
NC_000921:1007519:1015042101504210164691428Helicobacter pylori J99, complete genomeDNA transfer protein5e-1377
NC_014555:1526775:1540379154037915427482370Helicobacter pylori PeCan4 chromosome, complete genomeVirB4-like protein2e-1171.6
NC_013416:939668:948744948744949481738Aggregatibacter actinomycetemcomitans D11S-1, complete genometype IV secretion system protein VirB46e-1170.1
NC_016610:1310275:1347745134774513502312487Tannerella forsythia ATCC 43037 chromosome, complete genomeconjugation system ATPase, TraG family2e-1068.9
NC_014256:448710:4557574557574579102154Helicobacter pylori B8 chromosome, complete genomeprotein virB42e-1068.9
NC_016776:5174606:5194576519457651970772502Bacteroides fragilis 638R, complete genomehypothetical protein2e-1068.6
NC_005090:1033746:1054413105441310567012289Wolinella succinogenes DSM 1740, complete genomeVIRB4 HOMOLOG3e-1068.2
NC_015501:1941851:1963805196380519663212517Porphyromonas asaccharolytica DSM 20707 chromosome, completeconjugation system ATPase, TraG family4e-1067.8
NC_018939:454000:4593394593394617622424Helicobacter pylori 26695 chromosome, complete genomeVirB4-like protein4e-1067.4
NC_000915:453958:4593334593334617562424Helicobacter pylori 26695, complete genomeVirB4 homolog4e-1067.4
NC_006347:112500:1274141274141299182505Bacteroides fragilis YCH46, complete genomeTraG5e-1067
NC_011498:448000:4871074871074895292423Helicobacter pylori P12, complete genome5e-1067
NC_015164:2961906:2970279297027929727832505Bacteroides salanitronis DSM 18170 chromosome, complete genomeconjugation system ATPase, TraG family5e-1067
NC_003228:2010643:2053558205355820560592502Bacteroides fragilis NCTC 9343, complete genomeputative conserved protein found in conjugate transposon7e-1066.6
NC_017361:1528239:1530624153062415330472424Helicobacter pylori SouthAfrica7 chromosome, complete genomeVirB4-like protein1e-0965.9
NC_016582:10159486:1016391410163914101657731860Streptomyces bingchenggensis BCW-1 chromosome, complete genometype IV secretory pathway VirB4 protein-like protein1e-0759.3
NC_006347:1585191:1596355159635515988682514Bacteroides fragilis YCH46, complete genomeconserved protein found in conjugate transposon1e-0759.3
NC_017366:1055319:1061646106164610626621017Helicobacter pylori F32, complete genomevirB4 type IV secretion ATPase1e-0758.9
NC_016776:1609476:1621977162197716243732397Bacteroides fragilis 638R, complete genomehypothetical protein3e-0758.2
NC_013131:7889127:7910120791012079119461827Catenulispora acidiphila DSM 44928, complete genometype IV secretory pathway VirB4 protein-like protein3e-0654.7
NC_015377:34445:3444534445370422598Burkholderia gladioli BSR3 plasmid bgla_2p, complete sequencehypothetical protein3e-0654.3