Pre_GI: BLASTP Hits

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Query: NC_008543:127675:149168 Burkholderia cenocepacia HI2424 chromosome 2, complete sequence

Start: 149168, End: 149488, Length: 321

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism (HI2424; BCC1) was isolated as part of a study to find this organism in natural environments. Samples taken from fields that were planted with onions in New York in 1999 and 2000 were examined and it was discovered that isolates were the same as ones that can infect CF patients. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008061:2106848:212028121202812120619339Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencetype IV secretory pathway, VirB3-like8e-55211
NC_010515:1124298:113773311377331138053321Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencetype IV secretory pathway VirB3 family protein2e-50197
NC_011001:372185:380678380678381016339Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative type IV secretion system protein VirB34e-50196
NC_010676:2793237:279570427957042796048345Burkholderia phytofirmans PsJN chromosome 2, complete sequencetype IV secretory pathway VirB3 family protein4e-38156
NC_010524:933191:937131937131937463333Leptothrix cholodnii SP-6, complete genometype IV secretory pathway VirB3 family protein1e-0962.4
NC_013592:2968500:2998530299853030012742745Dickeya dadantii Ech586, complete genomeCagE, TrbE, VirB component of type IV transporter system, conserved region2e-0858.2
NC_012731:3411161:3450241345024134529792739Klebsiella pneumoniae NTUH-K2044 chromosome, complete genometype IV secretory pathway VirB3-4 component3e-0857.4
NC_009792:859228:8810098810098837472739Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein3e-0857.4
NC_020181:473170:4949524949524976902739Enterobacter aerogenes EA1509E, complete genomeATPase provides energy for both assembly of type IV secretion complex and secretion of T-DNA complex (VirB4)3e-0857.4
NC_016845:3448881:3469356346935634720942739Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative type IV secretory pathway VirB4 component3e-0857.4
NC_014801:1:2335823358261262769Campylobacter jejuni subsp. jejuni ICDCCJ07001 plasmid pTet,type IV secretion system protein VirB42e-0755.1
NC_011092:76993:8981789817925672751Salmonella enterica subsp. enterica serovar Schwarzengrund strTriC protein4e-0753.5
NC_011071:2733438:274763227476322747940309Stenotrophomonas maltophilia R551-3, complete genometype IV secretory pathway VirB3 family protein2e-0651.2
NC_015947:2752450:276598527659852766293309Burkholderia sp. JV3 chromosome, complete genometype IV secretory pathway VirB3 family protein2e-0650.8
NC_013722:2150882:215963521596352159946312Xanthomonas albilineans, complete genomeprobable type iv secretion system protein virb33e-0650.4
NC_010943:3034366:304593130459313046239309Stenotrophomonas maltophilia K279a, complete genomeputative type IV secretion system transmembrane protein7e-0649.3