Pre_GI Gene

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Host: NC_008542 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008542:197500 Burkholderia cenocepacia HI2424 chromosome 1, complete sequence

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism (HI2424; BCC1) was isolated as part of a study to find this organism in natural environments. Samples taken from fields that were planted with onions in New York in 1999 and 2000 were examined and it was discovered that isolates were the same as ones that can infect CF patients. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
197615198499885amidohydrolase 2QuickGO ontologyBLASTP
1986091998711263major facilitator superfamily MFS_1QuickGO ontologyBLASTP
1999052010621158outer membrane protein porinQuickGO ontologyBLASTP
2011752028721698Carboxylesterase type BQuickGO ontologyBLASTP
203608204030423transcriptional regulator HxlR familyQuickGO ontologyBLASTP
204123205076954NmrA family proteinQuickGO ontologyBLASTP
2068952081031209hypothetical proteinBLASTP
2083212096281308hypothetical proteinBLASTP
209831210478648hypothetical protein
2104752116261152protein of unknown function DUF955QuickGO ontologyBLASTP
212767213036270Sel1 domain protein repeat-containing proteinQuickGO ontologyBLASTP
213275213565291hypothetical proteinBLASTP
2135782149121335hypothetical proteinBLASTP
215234215902669hypothetical proteinBLASTP
2158862170341149hypothetical proteinBLASTP
217031217984954hypothetical proteinBLASTP
218500218814315hypothetical protein
219131219466336hypothetical protein
219607220080474hypothetical proteinBLASTP
220256220585330transcriptional regulator XRE familyQuickGO ontologyBLASTP
220586221224639hypothetical proteinBLASTP
221226221519294plasmid related proteinQuickGO ontologyBLASTP
221516221899384hypothetical proteinBLASTP
2223692234511083hypothetical proteinBLASTP
223448224398951hypothetical proteinBLASTP
224462225457996GP47QuickGO ontologyBLASTP
225532226500969hypothetical proteinBLASTP
2275572296262070ATP-dependent endonuclease of the OLD family-like proteinQuickGO ontologyBLASTP
2296192313551737hypothetical proteinBLASTP
231370232266897hypothetical proteinBLASTP
2325172336561140phage integrase family proteinQuickGO ontologyBLASTP
2339282353701443hypothetical proteinBLASTP
2353762364461071hypothetical proteinBLASTP
2364472394793033Integrase catalytic regionQuickGO ontologyBLASTP