Pre_GI: BLASTP Hits

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Query: NC_008542:197500:232517 Burkholderia cenocepacia HI2424 chromosome 1, complete sequence

Start: 232517, End: 233656, Length: 1140

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism (HI2424; BCC1) was isolated as part of a study to find this organism in natural environments. Samples taken from fields that were planted with onions in New York in 1999 and 2000 were examined and it was discovered that isolates were the same as ones that can infect CF patients. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007951:2206263:2211429221142922125771149Burkholderia xenovorans LB400 chromosome 1, complete sequencePutative integrase/recombinase9e-78290
NC_013722:2150882:2175502217550221766951194Xanthomonas albilineans, complete genomeputative phage-related integrase protein6e-56218
NC_010688:3229820:3236495323649532376431149Xanthomonas campestris pv. campestris, complete genomephage-related integrase7e-49194
NC_007086:3334000:3339234333923433403821149Xanthomonas campestris pv. campestris str. 8004, complete genomephage-related integrase7e-49194
NC_003902:1680414:1701875170187517030231149Xanthomonas campestris pv. campestris str. ATCC 33913, completephage-related integrase7e-49194
NC_015580:3834244:3840713384071338418881176Novosphingobium sp. PP1Y, complete genomephage-related integrase1e-46187
NC_008060:3155133:319304531930453193317273Burkholderia cenocepacia AU 1054 chromosome 1, complete sequencephage-related integrase2e-38160
NC_014217:2760898:2760898276089827622741377Starkeya novella DSM 506 chromosome, complete genomeintegrase family protein4e-22106
NC_008340:1733735:174806117480611748975915Alkalilimnicola ehrlichei MLHE-1, complete genomephage integrase family protein4e-0859.7
NC_014355:243543:2579012579012590221122Candidatus Nitrospira defluvii, complete genomephage integrase1e-0757.8
NC_010172:57500:1059661059661072881323Methylobacterium extorquens PA1, complete genomeintegrase family protein3e-0756.2
NC_012988:32996:5143051430527401311Methylobacterium extorquens DM4, complete genomesite-specific recombinase4e-0756.2
NC_015497:2997275:3004091300409130054701380Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomeintegrase family protein7e-0755.5
NC_008687:302450:3053223053223065031182Paracoccus denitrificans PD1222 chromosome 2, complete sequencephage integrase family protein7e-0755.1
NC_008789:350650:3635873635873647261140Halorhodospira halophila SL1, complete genomephage integrase family protein8e-0755.1
NC_014355:1223243:1233478123347812345481071Candidatus Nitrospira defluvii, complete genomeputative integrase9e-0755.1
NC_011757:97281:1112141112141125361323Methylobacterium chloromethanicum CM4, complete genomeintegrase family protein1e-0654.7
NC_008702:2039462:2046178204617820472541077Azoarcus sp. BH72, complete genomesite-specific recombinase, phage integrase family4e-0652.8
NC_015458:2338437:2340983234098323420711089Pusillimonas sp. T7-7 chromosome, complete genomesite-specific recombinase, phage integrase family5e-0652.4