Pre_GI: BLASTP Hits

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Query: NC_008542:197500:229619 Burkholderia cenocepacia HI2424 chromosome 1, complete sequence

Start: 229619, End: 231355, Length: 1737

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism (HI2424; BCC1) was isolated as part of a study to find this organism in natural environments. Samples taken from fields that were planted with onions in New York in 1999 and 2000 were examined and it was discovered that isolates were the same as ones that can infect CF patients. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011901:2983555:2991824299182429935631740Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completehypothetical protein0961
NC_010338:4108280:4126107412610741278731767Caulobacter sp. K31, complete genomeDNA helicase II0638
NC_019904:5308998:5317528531752853192731746Echinicola vietnamensis DSM 17526 chromosome, complete genomeDNA/RNA helicase5e-162571
NC_017030:9818064:9829517982951798312741758Corallococcus coralloides DSM 2259 chromosome, complete genomeDNA helicase II4e-157555
NC_015422:2806832:2825746282574628275031758Alicycliphilus denitrificans K601 chromosome, complete genomeUvrD/REP helicase3e-61236
NC_015422:1643000:1647481164748116493581878Alicycliphilus denitrificans K601 chromosome, complete genomehypothetical protein1e-53211
NC_018866:1328623:1337548133754813392661719Dehalobacter sp. DCA chromosome, complete genomehypothetical protein8e-51202
NC_007951:2904644:2919786291978629216631878Burkholderia xenovorans LB400 chromosome 1, complete sequencehypothetical protein2e-50201
NC_014618:690056:7165647165647184411878Enterobacter cloacae SCF1 chromosome, complete genomehypothetical protein1e-50201
NC_011206:262844:2812752812752831641890Acidithiobacillus ferrooxidans ATCC 53993, complete genomehypothetical protein2e-42174
NC_015733:3736104:3761736376173637636071872Pseudomonas putida S16 chromosome, complete genomepathogenesis-like protein4e-41170
NC_009441:4328035:4348817434881743507301914Flavobacterium johnsoniae UW101 chromosome, complete genomesuperfamily I DNA/RNA helicase-like protein3e-40167
NC_013132:5250385:5275205527520552770911887Chitinophaga pinensis DSM 2588, complete genomehypothetical protein1e-39164
NC_017025:1761918:1761918176191817637921875Flavobacterium indicum GPTSA100-9, complete genomehypothetical protein2e-39164
NC_015138:2069739:2082950208295020848871938Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeUvrD/REP helicase9e-39162
NC_015730:1918000:1927195192719519291351941Roseobacter litoralis Och 149 chromosome, complete genomeDNA helicase-like protein8e-39162
NC_008463:5313527:5350432535043253523631932Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein3e-38160
NC_007929:1637261:1646014164601416477051692Lactobacillus salivarius subsp. salivarius UCC118, complete genomeDNA helicase2e-35150
NC_015379:908904:9669279669279688011875Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Hypothetical protein2e-35150
NC_008686:1383891:1407734140773414096861953Paracoccus denitrificans PD1222 chromosome 1, complete sequencepathogenesis-related protein7e-35149
NC_007946:289425:2977872977872996251839Escherichia coli UTI89, complete genomehypothetical protein1e-34148
NC_007651:3064530:3114998311499831169171920Burkholderia thailandensis E264 chromosome I, complete sequencepathogenesis-related protein1e-34147
NC_009076:3765441:3793511379351137954061896Burkholderia pseudomallei 1106a chromosome I, complete sequencehypothetical protein1e-29131
NC_013456:1843000:1851723185172318536271905Vibrio sp. Ex25 chromosome 1, complete genomeDNA helicase2e-27124
NC_010995:4460413:4468461446846144705782118Cellvibrio japonicus Ueda107, complete genomeUvrD/REP helicase3e-21103
NC_008750:807446:8166548166548187892136Shewanella sp. W3-18-1, complete genomehypothetical protein6e-1686.3
NC_014306:4106569:411844041184404119342903Erwinia billingiae Eb661, complete genomehypothetical protein8e-1479.3
NC_016816:1545354:1565539156553915675962058Pantoea ananatis LMG 5342, complete genomeUvrD/REP helicase1e-1275.1
NC_002516:2113186:211703021170302117734705Pseudomonas aeruginosa PAO1, complete genomehypothetical protein4e-0653.5