Pre_GI Gene

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Host: NC_008268 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008268:6149576 Rhodococcus sp. RHA1, complete genome

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
61495766150556981ribose-phosphate diphosphokinaseQuickGO ontologyBLASTP
615055361520551503UDP-N-acetylglucosamine diphosphorylase glucosamine-1-phosphate N-acetyltransferaseQuickGO ontologyBLASTP
61523866153054669probable transcriptional regulator TetR familyQuickGO ontologyBLASTP
61531696153810642possible transcriptional regulator TetR familyQuickGO ontologyBLASTP
615383261551211290glutamate-1-semialdehyde 21-aminomutaseQuickGO ontologyBLASTP
61551306155483354hypothetical protein
615545961568831425possible polysaccharide pyruvyl transferaseQuickGO ontologyBLASTP
61568256157523699possible ribosomal-protein-alanine N-acetyltransferaseQuickGO ontologyBLASTP
615781061589221113hypothetical proteinBLASTP
61589476159564618hypothetical proteinBLASTP
615956761609311365possible mannuronan epimeraseQuickGO ontologyBLASTP
616092861623221395possible protein-tyrosine kinase C-terminalQuickGO ontologyBLASTP
616232861640011674hypothetical protein
616402661650301005hypothetical proteinBLASTP
616502761663161290probable O-antigen transporter MOP superfamilyQuickGO ontologyBLASTP
616630961674901182possible glycosyltransferaseQuickGO ontologyBLASTP
616748761685091023probable glycosyltransferaseQuickGO ontologyBLASTP
61688486169696849possible glycosyl transferaseQuickGO ontologyBLASTP
616978061712281449sugar transferaseQuickGO ontologyBLASTP
617122561724631239possible transferaseQuickGO ontologyBLASTP
61725266173080555dTDP-4-dehydrorhamnose 35-epimeraseQuickGO ontologyBLASTP
617310061741401041probable UDP-glucose 4-epimeraseQuickGO ontologyBLASTP
61741426174792651hypothetical proteinBLASTP
61747926175586795probable glucose-1-phosphate cytidylyltransferaseQuickGO ontologyBLASTP
617558361768421260probable methyltransferaseQuickGO ontologyBLASTP