Pre_GI: BLASTP Hits

Some Help

Query: NC_008268:6149576:6153169 Rhodococcus sp. RHA1, complete genome

Start: 6153169, End: 6153810, Length: 642

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008269:577111:589036589036589572537Rhodococcus sp. RHA1 plasmid pRHL1, complete sequencepossible transcriptional regulator, TetR family8e-33140
NC_016109:116995:125292125292125933642Kitasatospora setae KM-6054, complete genomeputative gamma-butyrolactone receptor protein3e-1581.6
NC_016111:6222461:6231155623115562325131359Streptomyces cattleya NRRL 8057, complete genomeKsbA5e-1581.3
NC_016111:6222461:624964762496476250315669Streptomyces cattleya NRRL 8057, complete genomeBarB9e-1477
NC_016113:887582:899764899764900378615Streptomyces cattleya NRRL 8057 plasmid pSCAT, complete sequenceprotein FarA1e-1066.6
NC_003869:74836:778127781278402591Thermoanaerobacter tengcongensis MB4, complete genomeTranscriptional regulator1e-0860.1
NC_016109:116995:120128120128120724597Kitasatospora setae KM-6054, complete genomeputative TetR family transcriptional regulator1e-0860.1
NC_015578:3266855:327350432735043274073570Treponema primitia ZAS-2 chromosome, complete genomeThlR, HTH transcriptional regulator TetR/AcrR family1e-0860.1
NC_015580:1328361:132836113283611329092732Novosphingobium sp. PP1Y, complete genomeTetR family transcriptional regulator4e-0858.2
NC_015458:2441435:244083024408302441438609Pusillimonas sp. T7-7 chromosome, complete genometranscriptional regulator4e-0858.2
NC_010170:4409683:442852144285214429150630Bordetella petrii, complete genomePutative HTH-type transcriptional regulator, AcrR-family6e-0857.8
NC_009077:4810379:482799648279964828661666Mycobacterium sp. JLS, complete genometranscriptional regulator, TetR family2e-0755.8
NC_017161:1117741:112188511218851122460576Hydrogenobacter thermophilus TK-6 chromosome, complete genomeTetR family transcriptional regulator3e-0755.1
NC_013799:1117750:112189411218941122469576Hydrogenobacter thermophilus TK-6, complete genometranscriptional regulator, TetR family3e-0755.1
NC_015958:84270:861788617886756579Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomeTetR family transcriptional regulator3e-0755.1
NC_008577:1489643:151097015109701511590621Shewanella sp. ANA-3 chromosome 1, complete sequencetranscriptional regulator, TetR family3e-0755.1
NC_008752:415599:420283420283420975693Acidovorax avenae subsp. citrulli AAC00-1, complete genometranscriptional regulator, TetR family5e-0754.7
NC_014209:81643:119504119504120079576Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,transcriptional regulator, TetR family5e-0754.7
NC_014910:465980:472096472096472716621Alicycliphilus denitrificans BC chromosome, complete genomeregulatory protein tetr6e-0754.3
NC_013406:5066769:508499650849965085649654Paenibacillus sp. Y412MC10 chromosome, complete genomeTetR family transcriptional regulator8e-0753.9
NC_008563:4707826:472109047210904721461372Escherichia coli APEC O1, complete genomeputative transcriptional repressor1e-0653.5
NC_014655:851381:857506857506858096591Leadbetterella byssophila DSM 17132 chromosome, complete genometranscriptional regulator, tetr family1e-0653.5
NC_014210:144036:145231145231145830600Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,transcriptional regulator, TetR family1e-0653.5
NC_010002:528529:533152533152533817666Delftia acidovorans SPH-1, complete genometranscriptional regulator, TetR family1e-0653.5
NC_011745:3405520:341233534123353412706372Escherichia coli ED1a chromosome, complete genomehypothetical protein1e-0653.1
NC_004431:4319152:432716243271624327731570Escherichia coli CFT073, complete genomehypothetical protein2e-0652.8
NC_012108:904260:918404918404919174771Desulfobacterium autotrophicum HRM2, complete genometranscriptional regulator (TetR family protein)2e-0652.8
NC_017075:1674758:169781216978121698459648Rubrivivax gelatinosus IL144, complete genomeTetR family transcriptional regulator2e-0652.4
NC_018868:2935580:295135029513502951889540Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genometranscriptional regulator2e-0652.4
NC_009439:918534:937355937355937975621Pseudomonas mendocina ymp, complete genomeTetR family transcriptional regulator2e-0652.4
NC_016947:2380500:240160224016022402195594Mycobacterium intracellulare MOTT-02 chromosome, complete genomeTetR family transcriptional regulator3e-0652
NC_009328:3241166:326696632669663267598633Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeTetR family transcriptional regulator3e-0651.6
NC_011894:6888562:689151368915136892166654Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, TetR family5e-0651.2
NC_012968:1191037:120521612052161205824609Methylotenera mobilis JLW8, complete genometranscriptional regulator, TetR family6e-0650.8
NC_010694:1966676:196889219688921969524633Erwinia tasmaniensis, complete genomeTetR-family transcriptional regulator7e-0650.8
NC_016935:4038265:404800040480004048605606Paenibacillus mucilaginosus 3016 chromosome, complete genomeTetR family transcriptional regulator8e-0650.4
NC_017986:4790482:483635748363574836962606Pseudomonas putida ND6 chromosome, complete genomeTetR family transcriptional regulator9e-0650.4
NC_002939:805794:826391826391826981591Geobacter sulfurreducens PCA, complete genometranscriptional regulator, TetR family9e-0650.4
NC_009512:2108686:213674621367462137351606Pseudomonas putida F1, complete genometranscriptional regulator, TetR family9e-0650.4
NC_013595:8553904:856484385648438565427585Streptosporangium roseum DSM 43021, complete genomeputative transcriptional regulator, TetR family1e-0550.1