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Query: NC_008268:6149576 Rhodococcus sp. RHA1, complete genome

Start: 6149576, End: 6176842, Length: 27267

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_004369:1051013*1051013107385922847Corynebacterium efficiens YS-314, complete genome1e-82315BLASTN svgBLASTP svg
NC_009664:1195630*1195630122637430745Kineococcus radiotolerans SRS30216, complete genome1e-33153BLASTN svgBLASTP svg
NC_008596:60095116009511605382644316Mycobacterium smegmatis str. MC2 155, complete genome1e-27133BLASTN svgBLASTP svg
NC_014550:88950088950091578326284Arthrobacter arilaitensis Re117, complete genome2e-26129BLASTN svgBLASTP svg
NC_013947:1363078*1363078138138918312Stackebrandtia nassauensis DSM 44728 chromosome, complete genome2e-22115BLASTN svgBLASTP svg
NC_013757:36897336897341230243330Geodermatophilus obscurus DSM 43160, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_014158:73344733449383820495Tsukamurella paurometabola DSM 20162 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_012590:97792097792099992822009Corynebacterium aurimucosum ATCC 700975, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_005070:904751*90475196751962769Synechococcus sp. WH 8102, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_009439:1174432*1174432119973625305Pseudomonas mendocina ymp, complete genome5e-0867.9BLASTN svgBLASTP svg