Pre_GI: BLASTP Hits

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Query: NC_008268:6149576:6165027 Rhodococcus sp. RHA1, complete genome

Start: 6165027, End: 6166316, Length: 1290

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017272:607900:6201606201606214491290Thermus thermophilus SG0.5JP17-16 chromosome, complete genomepolysaccharide biosynthesis protein4e-0859.7
NC_013946:2050871:2064784206478420660581275Meiothermus ruber DSM 1279 chromosome, complete genomepolysaccharide biosynthesis protein4e-0859.7
NC_006461:605249:6171536171536184181266Thermus thermophilus HB8, complete genomeputative O-antigen transporter2e-0757.8
NC_014212:2776457:2790238279023827914761239Meiothermus silvanus DSM 9946 chromosome, complete genomepolysaccharide biosynthesis protein3e-0756.6
NC_011916:467106:4804394804394817101272Caulobacter crescentus NA1000 chromosome, complete genomeoligosaccharide translocase/flippase2e-0654.3