Pre_GI Gene

Some Help

Host: NC_008044 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008044:1736000 Silicibacter sp. TM1040, complete genome

Host Lineage: Ruegeria; Ruegeria; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: This strain was isolated from a culture of the dinoflagellate Pfiesteria piscicida CCMP1830 which has been implicated in many large scale algal blooms resulting in increased mortality in fish. The bacteria are attached to the surface of the dinoflagellate and in some ways allow the dinoflagellate to grow as those lacking the bacteria die off. The bacterium also chemotaxes towards the dinoflagellate product DMSP (dimethylsulfoniopropionate) and metabolizes it. DMSP is a major source of sulfur in marine ecosystems and plays a role in the sulfur biogeochemical cycle. The implication is a tight association between these important dinoflagellates and this marine bacterium.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
173614417380181875hypothetical proteinBLASTP
17380481738329282hypothetical protein
17383331739175843hypothetical protein
17391721739651480hypothetical proteinBLASTP
17396411740522882hypothetical proteinBLASTP
17405191740797279hypothetical protein
17409641741440477hypothetical protein
17418141742167354transcriptional regulator XRE familyQuickGO ontology
17423331743016684hypothetical protein
17429741743864891hypothetical protein
17440871744389303hypothetical protein
17446981745402705hypothetical protein
17455941745950357hypothetical protein
174594717478181872ParB-like nucleaseQuickGO ontologyBLASTP
17481761748427252hypothetical protein
174841717496491233hypothetical proteinBLASTP
17503711751012642Resolvase-likeQuickGO ontologyBLASTP
17511441751659516hypothetical protein
17516381752096459hypothetical protein
17521651752485321hypothetical protein
17525671752965399hypothetical proteinBLASTP
17529621753771810protein of unknown function DUF847QuickGO ontologyBLASTP
17537731754207435hypothetical proteinBLASTP
17542041754461258hypothetical proteinBLASTP
17545071754854348hypothetical proteinBLASTP
17548321755464633hypothetical proteinBLASTP
17554611756456996hypothetical proteinBLASTP
17569751757919945hypothetical proteinBLASTP
175791617624424527hypothetical proteinBLASTP