Pre_GI: BLASTP Hits

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Query: NC_008044:1736000:1736144 Silicibacter sp. TM1040, complete genome

Start: 1736144, End: 1738018, Length: 1875

Host Lineage: Ruegeria; Ruegeria; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: This strain was isolated from a culture of the dinoflagellate Pfiesteria piscicida CCMP1830 which has been implicated in many large scale algal blooms resulting in increased mortality in fish. The bacteria are attached to the surface of the dinoflagellate and in some ways allow the dinoflagellate to grow as those lacking the bacteria die off. The bacterium also chemotaxes towards the dinoflagellate product DMSP (dimethylsulfoniopropionate) and metabolizes it. DMSP is a major source of sulfur in marine ecosystems and plays a role in the sulfur biogeochemical cycle. The implication is a tight association between these important dinoflagellates and this marine bacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020908:1920169:1925936192593619276961761Octadecabacter arcticus 238, complete genomehypothetical protein2e-55217
NC_015136:2021799:2045288204528820481372850Burkholderia sp. CCGE1001 chromosome 1, complete sequenceToprim sub domain-containing protein9e-22105
NC_014910:966761:9758909758909775841695Alicycliphilus denitrificans BC chromosome, complete genomehypothetical protein2e-1688.2
NC_014664:1614568:1614568161456816171172550Rhodomicrobium vannielii ATCC 17100 chromosome, complete genomehypothetical protein5e-1479.7