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Query: NC_008044:1736000:1755461 Silicibacter sp. TM1040, complete genome

Start: 1755461, End: 1756456, Length: 996

Host Lineage: Ruegeria; Ruegeria; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: This strain was isolated from a culture of the dinoflagellate Pfiesteria piscicida CCMP1830 which has been implicated in many large scale algal blooms resulting in increased mortality in fish. The bacteria are attached to the surface of the dinoflagellate and in some ways allow the dinoflagellate to grow as those lacking the bacteria die off. The bacterium also chemotaxes towards the dinoflagellate product DMSP (dimethylsulfoniopropionate) and metabolizes it. DMSP is a major source of sulfur in marine ecosystems and plays a role in the sulfur biogeochemical cycle. The implication is a tight association between these important dinoflagellates and this marine bacterium.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008044:857759:8648778648778663941518Silicibacter sp. TM1040, complete genomehypothetical protein2e-172605
NC_007205:887912:89575489575491770721954Candidatus Pelagibacter ubique HTCC1062, complete genomehypothetical protein2e-28126
NC_014820:877724:8922158922159008518637Cenarchaeum symbiosum A, complete genomehypothetical protein2e-22107
NC_014820:582443:6192556192556237124458Cenarchaeum symbiosum A, complete genomehypothetical protein2e-1893.6
NC_014820:582443:6079726079726097801809Cenarchaeum symbiosum A, complete genomehypothetical protein6e-1685.1
NC_014820:582443:5863595863595912304872Cenarchaeum symbiosum A, complete genomehypothetical protein3e-1479.3
NC_014820:582443:5846005846005862701671Cenarchaeum symbiosum A, complete genomehypothetical protein3e-1376.3
NC_020389:415500:4302094302094316421434Methanosarcina mazei Tuc01, complete genomehypothetical protein8e-0754.7
NC_003901:500500:5162675162675177001434Methanosarcina mazei Go1, complete genomeputative surface layer protein8e-0754.7
NC_020389:1730376:1739312173931217425843273Methanosarcina mazei Tuc01, complete genomehypothetical protein9e-0754.7
NC_003552:3862275:3874976387497638764391464Methanosarcina acetivorans C2A, complete genomesurface antigen gene2e-0653.9
NC_015380:196554:2114202114202138672448Candidatus Pelagibacter sp. IMCC9063 chromosome, complete genomeouter membrane autotransporter2e-0653.5