Pre_GI: BLASTP Hits

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Query: NC_008044:1736000:1745947 Silicibacter sp. TM1040, complete genome

Start: 1745947, End: 1747818, Length: 1872

Host Lineage: Ruegeria; Ruegeria; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: This strain was isolated from a culture of the dinoflagellate Pfiesteria piscicida CCMP1830 which has been implicated in many large scale algal blooms resulting in increased mortality in fish. The bacteria are attached to the surface of the dinoflagellate and in some ways allow the dinoflagellate to grow as those lacking the bacteria die off. The bacterium also chemotaxes towards the dinoflagellate product DMSP (dimethylsulfoniopropionate) and metabolizes it. DMSP is a major source of sulfur in marine ecosystems and plays a role in the sulfur biogeochemical cycle. The implication is a tight association between these important dinoflagellates and this marine bacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011963:1979136:1979136197913619809591824Rhodobacter sphaeroides KD131 chromosome 1, complete sequenceParB family protein1e-85317
NC_011958:735755:755097755097755990894Rhodobacter sphaeroides KD131 chromosome 2, complete genomeParB family protein4e-44179
NC_009937:4392108:4392108439210843941712064Azorhizobium caulinodans ORS 571, complete genomeParB-like partition protein1e-29131
NC_010725:3273261:3287698328769832898422145Methylobacterium populi BJ001, complete genomeParB domain protein nuclease8e-29129
NC_014217:2987450:2989997298999729920602064Starkeya novella DSM 506 chromosome, complete genomeParB domain protein nuclease2e-28127
NC_009720:813157:8158788158788180822205Xanthobacter autotrophicus Py2, complete genomenuclease3e-27124
NC_010158:92819:1125241125241145332010Yersinia pestis Angola plasmid pMT-pPCP, complete sequenceParB domain protein3e-27124
NC_008118:56777:98872988721008812010Yersinia pestis Nepal516 plasmid pMT, complete sequenceDNA-binding protein2e-27124
NC_004838:51013:7073070730727392010Yersinia pestis KIM plasmid pMT-1, complete sequencehypothetical protein2e-27124
NC_005815:61148:8390783907859162010Yersinia pestis biovar Microtus str. 91001 plasmid pMT1, completeputative DNA-binding protein2e-27124
NC_009378:106193:1349641349641369732010Yersinia pestis Pestoides F plasmid MT, complete sequenceDNA-binding protein2e-27124
NC_009668:445134:4816144816144837642151Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequencehypothetical protein4e-26120
NC_020453:3950838:3981993398199339840082016Agromonas oligotrophica S58 DNA, complete genomehypothetical protein2e-25117
NC_015580:293803:3170463170463192202175Novosphingobium sp. PP1Y, complete genomeParB family chromosome partitioning protein4e-25116
NC_010170:4800000:4813659481365948157702112Bordetella petrii, complete genomeParB-like nuclease1e-24115
NC_012988:1280610:1280610128061012827692160Methylobacterium extorquens DM4, complete genomeplasmid stabilization protein4e-24113
NC_011365:1171536:1186452118645211885092058Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeParB domain-containing protein nuclease2e-23111
NC_009720:5046861:5062145506214550642082064Xanthobacter autotrophicus Py2, complete genomeparB-like partition protein3e-23110
NC_004349:3938:2277922779246531875Shewanella oneidensis MR-1 plasmid pMR-1, complete sequencepartition protein, ParB family, putative1e-22108
NC_015422:1694363:1696336169633616983872052Alicycliphilus denitrificans K601 chromosome, complete genomeParB domain-containing protein nuclease2e-22107
NC_010125:955863:9702419702419722982058Gluconacetobacter diazotrophicus PAl 5, complete genomehypothetical protein6e-22106
NC_007414:56508:7045370453724712019Escherichia coli O157:H7 EDL933 plasmid pO157, complete sequencehypothetical protein7e-22106
NC_009720:622262:6440426440426461052064Xanthobacter autotrophicus Py2, complete genomeparB-like partition protein1e-21105
NC_010125:74904:8867788677907342058Gluconacetobacter diazotrophicus PAl 5, complete genome1e-21105
NC_002128:35000:4793847938498961959Escherichia coli O157:H7 str. Sakai plasmid pO157, completehypothetical protein9e-22105
NC_015136:1141925:1144886114488611471292244Burkholderia sp. CCGE1001 chromosome 1, complete sequencechromosome partioning protein ParB8e-22105
NC_010125:2884762:2891700289170028938322133Gluconacetobacter diazotrophicus PAl 5, complete genomeputative ParB-like nuclease1e-20102
NC_020829:2152000:2153691215369121557332043Pseudomonas denitrificans ATCC 13867, complete genomeputative chromosome segregation protein1e-20101
NC_009719:336000:3396883396883415981911Parvibaculum lavamentivorans DS-1 chromosome, complete genomenuclease3e-20100
NC_016147:1961000:1981052198105219831122061Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeputative chromosome segregation protein3e-20100
NC_008752:725189:7408687408687429132046Acidovorax avenae subsp. citrulli AAC00-1, complete genomeParB domain protein nuclease1e-1998.6
NC_010084:2484000:2533114253311425351622049Burkholderia multivorans ATCC 17616 chromosome 1, completenuclease1e-1998.6
NC_011958:735755:754292754292754885594Rhodobacter sphaeroides KD131 chromosome 2, complete genomeParB family protein3e-1997.4
NC_014305:126029:1260291260291280322004Erwinia billingiae Eb661 plasmid pEB170, complete sequenceParB-like nuclease4e-1997.1
NC_010002:3002354:3002354300235430044202067Delftia acidovorans SPH-1, complete genomeParB domain protein nuclease5e-1996.7
NC_017249:2109843:2109843210984321119662124Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein1e-1895.1
NC_008782:3110744:3112655311265531147062052Acidovorax sp. JS42, complete genomeParB domain protein nuclease2e-1894.7
NC_015381:2859000:2900012290001229020632052Burkholderia gladioli BSR3 chromosome 1, complete sequencenuclease3e-1894.4
NC_010943:1332243:1357451135745113594812031Stenotrophomonas maltophilia K279a, complete genomeputative ParB-like nuclease domain protein2e-1894.4
NC_007951:2087385:2088389208838920906862298Burkholderia xenovorans LB400 chromosome 1, complete sequencePutative chromosome partitioning nuclease, ParB3e-1894
NC_015186:2931000:2932165293216529343542190Acidiphilium multivorum AIU301, complete genomehypothetical protein6e-1893.2
NC_010338:4108280:4130621413062141327052085Caulobacter sp. K31, complete genomeParB domain protein nuclease5e-1790.1
NC_014910:242845:2722082722082742622055Alicycliphilus denitrificans BC chromosome, complete genomeparb domain protein nuclease1e-1689
NC_010170:2246993:2259737225973722618002064Bordetella petrii, complete genomeParB-like nuclease4e-1687
NC_010505:5496170:5520586552058655223731788Methylobacterium radiotolerans JCM 2831, complete genomeParB domain protein nuclease1e-1585.1
NC_003295:2787371:2817109281710928189021794Ralstonia solanacearum GMI1000, complete genomehypothetical protein2e-1584.7
NC_011992:1318691:1336817133681713388862070Acidovorax ebreus TPSY, complete genomeParB domain protein nuclease2e-1584.7
NC_018691:3041851:3056596305659630586742079Alcanivorax dieselolei B5 chromosome, complete genomePutative ParB-like nuclease domain protein (Rc106)2e-1584.3
NC_009656:3869281:3874118387411838761962079Pseudomonas aeruginosa PA7 chromosome, complete genomenuclease4e-1584
NC_014098:3372000:337624933762493377112864Bacillus tusciae DSM 2912 chromosome, complete genomeparB-like partition protein4e-0860.1
NC_015259:485015:5206245206245224651842Polymorphum gilvum SL003B-26A1 chromosome, complete genomeHelix-turn-helix, Fis-type1e-0758.9